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3x4Hyp-5Hyl-COL3A1(949-1221) [extracellular region]
Stable Identifier
R-RNO-2468098
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
extracellular region
Synonyms
P13941
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Rattus norvegicus)
Degradation of the extracellular matrix (Rattus norvegicus)
Collagen degradation (Rattus norvegicus)
Collagen type III degradation by MMP1,8,9,13 (Rattus norvegicus)
Cleaved collagen type III fibril [extracellular region] (Rattus norvegicus)
Cleaved tropocollagen type III [extracellular region] (Rattus norvegicus)
Cleaved collagen alpha-1(III) chains [extracellular region] (Rattus norvegicus)
3x4Hyp-5Hyl-COL3A1(949-1221) [extracellular region] (Rattus norvegicus)
Collagen type III degradation by MMP14 (Rattus norvegicus)
Cleaved collagen type III fibril [extracellular region] (Rattus norvegicus)
Cleaved tropocollagen type III [extracellular region] (Rattus norvegicus)
Cleaved collagen alpha-1(III) chains [extracellular region] (Rattus norvegicus)
3x4Hyp-5Hyl-COL3A1(949-1221) [extracellular region] (Rattus norvegicus)
Collagen type III degradation by MMP15 (Rattus norvegicus)
Cleaved collagen type III fibril [extracellular region] (Rattus norvegicus)
Cleaved tropocollagen type III [extracellular region] (Rattus norvegicus)
Cleaved collagen alpha-1(III) chains [extracellular region] (Rattus norvegicus)
3x4Hyp-5Hyl-COL3A1(949-1221) [extracellular region] (Rattus norvegicus)
Gelatin degradation by MMP1, 2, 3, 7, 8, 9, 12, 13 (Rattus norvegicus)
Cleaved collagen fibrils [extracellular region] (Rattus norvegicus)
Cleaved collagen type III fibril [extracellular region] (Rattus norvegicus)
Cleaved tropocollagen type III [extracellular region] (Rattus norvegicus)
Cleaved collagen alpha-1(III) chains [extracellular region] (Rattus norvegicus)
3x4Hyp-5Hyl-COL3A1(949-1221) [extracellular region] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P13941
Reference Genes
BioGPS Gene:84032
ENSEMBL:ENSRNOG00000003357
ENSEMBL:ENSRNOG00000003357.5
ENSEMBL:ENSRNOG00055004759
ENSEMBL:ENSRNOG00060016169
ENSEMBL:ENSRNOG00065029645
KEGG Gene (Rattus norvegicus):84032
Monarch:84032
NCBI Gene:84032
UCSC:P13941
Reference Transcript
RefSeq:NM_032085.1
Other Identifiers
10923052
1370959_at
17858944
5627936
5670575
5682812
5734306
5757977
5771331
5773172
5813713
5880562
5882583
5888051
5920036
5959081
5967668
5976980
5997036
6006887
6012991
6048275
6075051
6143174
6145126
6146413
6161793
6233178
6241362
6255882
6259096
6311465
6341154
6360335
6372977
6374411
6382919
6433701
6444288
6472725
6472751
6482089
6485346
6521992
6544106
6546094
6566101
6601571
6603648
6611882
6648841
6652063
6655879
6657624
6687482
6699261
6721119
6721841
6733289
84032
A_44_P146518
GO:0001568
GO:0001701
GO:0001764
GO:0001894
GO:0002062
GO:0005198
GO:0005201
GO:0005515
GO:0005581
GO:0005586
GO:0010467
GO:0021819
GO:0021987
GO:0023052
GO:0030154
GO:0030198
GO:0030199
GO:0030312
GO:0030324
GO:0031012
GO:0032905
GO:0035025
GO:0035264
GO:0035904
GO:0036022
GO:0043588
GO:0046332
GO:0048144
GO:0048251
GO:0048565
GO:0048856
GO:0048870
GO:0051216
GO:0060350
GO:0060414
GO:0071230
GO:0071711
GO:1990776
GO:2001223
ILMN_1354941
M21354_s_at
PH_rn_0012198
R46974_s_at
X70369_s_at
rc_AI236452_at
Participates
as a member of
Cleaved collagen alpha-1(III) chains [extracellular region] (Rattus norvegicus)
Other forms of this molecule
3x4Hyp-GlcGalHyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
GalHyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
GlcGalHyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
5Hyl-COL3A1(24-1466) [endoplasmic reticulum lumen]
3x4Hyp-COL3A1(24-1466) [extracellular region]
3x4Hyp-5Hyl-COL3A1(24-1466) [extracellular region]
COL3A1(24-1466) [extracellular region]
3x4Hyp-3Hyp-COL3A1(24-1466) [extracellular region]
GlcGalHyl-COL3A1(24-1466) [extracellular region]
5Hyl-COL3A1(24-1466) [extracellular region]
3x4Hyp-GlcGalHyl-COL3A1(24-1466) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL3A1(24-1466) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL3A1(24-1466) [extracellular region]
GalHyl-COL3A1(24-1466) [extracellular region]
3x4Hyp-GalHyl-COL3A1(24-1466) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL3A1(24-1466) [extracellular region]
3x4Hyp-5Hyl-COL3A1(154-1466) [extracellular region]
5Hyl-COL3A1(154-1466) [extracellular region]
GlcGalHyl-COL3A1(154-1466) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL3A1(154-1466) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL3A1(154-1466) [extracellular region]
COL3A1(154-1466) [extracellular region]
3x4Hyp-3Hyp-COL3A1(154-1466) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL3A1(154-1466) [extracellular region]
3x4Hyp-GalHyl-COL3A1(154-1466) [extracellular region]
GalHyl-COL3A1(154-1466) [extracellular region]
3x4Hyp-GlcGalHyl-COL3A1(154-1466) [extracellular region]
3x4Hyp-COL3A1(154-1466) [extracellular region]
5Hyl-COL3A1(154-948) [extracellular region]
3x4Hyp-GalHyl-COL3A1(949-1221) [extracellular region]
3x4Hyp-COL3A1(154-948) [extracellular region]
3x4Hyp-GalHyl-COL3A1(154-948) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL3A1(949-1221) [extracellular region]
3x4Hyp-COL3A1(949-1221) [extracellular region]
5Hyl-COL3A1(949-1221) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL3A1(154-948) [extracellular region]
GlcGalHyl-COL3A1(949-1241) [extracellular region]
3x4Hyp-3Hyp-COL3A1(949-1221) [extracellular region]
3x4Hyp-3Hyp-COL3A1(154-948) [extracellular region]
GalHyl-COL3A1(949-1221) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL3A1 [extracellular region]
3x4Hyp-GlcGalHyl-COL3A1 [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL3A1 [extracellular region]
5Hyl-COL3A1 [extracellular region]
GlcGalHyl-COL3A1(154-1241) [extracellular region]
3x4Hyp-GalHyl-COL3A1 [extracellular region]
3x4Hyp-5Hyl-COL3A1 [extracellular region]
GalHyl-COL3A1 [extracellular region]
3x4Hyp-COL3A1 [extracellular region]
COL3A1 [extracellular region]
3x4Hyp-3Hyp-COL3A1 [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL3A1 [extracellular region]
3x4Hyp-GlcGalHyl-COL3A1(154-948) [extracellular region]
3x4Hyp-GlcGalHyl-COL3A1(949-1221) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL3A1(154-948) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL3A1(154-948) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL3A1(949-1221) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL3A1(949-1221) [extracellular region]
3x4Hyp-5Hyl-COL3A1(154-948) [extracellular region]
GlcGalHyl-COL3A1(154-948) [extracellular region]
GalHyl-COL3A1(154-948) [extracellular region]
COL3A1(154-948) [extracellular region]
COL3A1(949-1221) [extracellular region]
Inferred From
3x4Hyp-5Hyl-COL3A1(949-1221) [extracellular region]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
NP_114474.1
Ensembl
ENSRNOT00000004956
,
ENSRNOG00000003357
,
ENSRNOP00000004956
PRO
P13941
RGD
71029
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