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Srsf9 [nucleoplasm]
Stable Identifier
R-RNO-72037
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
SRSF9, Q5PPI1
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
RNA Polymerase II Transcription Termination (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Metabolism of RNA (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
Transport of Mature Transcript to Cytoplasm (Rattus norvegicus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Rattus norvegicus)
Docking of the TAP:EJC Complex with the NPC (Rattus norvegicus)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Rattus norvegicus)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
mRNA 3'-end processing (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Spliced mRNP [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
mRNA polyadenylation (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of Exon Junction Complex (Rattus norvegicus)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal A Complex (Rattus norvegicus)
Spliceosomal A Complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Spliceosomal E Complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal B Complex (Rattus norvegicus)
Spliceosomal A Complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Spliceosomal B Complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Formation of the active Spliceosomal C (B*) complex (Rattus norvegicus)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Lariat Formation and 5'-Splice Site Cleavage (Rattus norvegicus)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Rattus norvegicus)
Srsf9 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q5PPI1
Gene Names
Srsf9
Reference Genes
BioGPS Gene:288701 Srsf9
ENSEMBL:ENSRNOG00000001163
ENSEMBL:ENSRNOG00000001163 Srsf9
KEGG Gene (Rattus norvegicus):288701 Srsf9
Monarch:288701 Srsf9
NCBI Gene:288701 Srsf9
UCSC:Q5PPI1 Srsf9
Reference Transcript
RefSeq:NM_001009255.1 Srsf9
Other Identifiers
10762704
1374442_at
17678677
288701
5671169
5836390
5924380
6341885
6392485
6562276
6703708
A_44_P173048
GE1278070
GO:0000381
GO:0003674
GO:0003676
GO:0003723
GO:0005515
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0005730
GO:0006397
GO:0008150
GO:0008380
GO:0009636
GO:0016607
GO:0019904
GO:0034641
GO:0043226
GO:0043279
GO:0045292
GO:0048025
ILMN_1349491
PH_rn_0003539
rc_AI227831_at
Participant Of
hasComponent
3' end cleaved, ligated exon containing complex [nucleoplasm]
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm]
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm]
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm]
Spliced mRNA:CBC:EJC:TREX [nucleoplasm]
Spliced mRNP [nucleoplasm]
Spliceosomal A Complex [nucleoplasm]
Spliceosomal Active C (B*) Complex [nucleoplasm]
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm]
Spliceosomal B Complex [nucleoplasm]
Spliceosomal E Complex [nucleoplasm]
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm]
output
Docking of the TAP:EJC Complex with the NPC
Inferred From
SRSF9 [nucleoplasm] (Homo sapiens)
Cross References
RefSeq
NP_001009255.1
Ensembl
ENSRNOP00000001539
,
ENSRNOG00000001163
,
ENSRNOT00000001539
PRO
Q5PPI1
RGD
1309495
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