Reactome | RPS29 [cytosol]

RPS29 [cytosol]

Stable Identifier

R-RNO-72367

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

cytosol

Synonyms

P62275

Locations in the PathwayBrowser

Expand all

Metabolism of RNA (Rattus norvegicus)

- Nonsense-Mediated Decay (NMD) (Rattus norvegicus)
  - Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Rattus norvegicus)
    - SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Rattus norvegicus)
      - SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
      - SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
    - SMG6 hydrolyzes mRNA with premature termination codon (Rattus norvegicus)
      - Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
    - UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Rattus norvegicus)
      - SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
      - Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
    - p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
      - Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
      - SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
  - Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Rattus norvegicus)
    - Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Rattus norvegicus)
      - Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
      - UPF1:eRF3 Complex on Translated mRNA [cytosol] (Rattus norvegicus)
        
        Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
        
        80S ribosome [cytosol] (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)
- rRNA processing (Rattus norvegicus)
  - rRNA processing in the nucleus and cytosol (Rattus norvegicus)
    - Major pathway of rRNA processing in the nucleolus and cytosol (Rattus norvegicus)
      - 18SE pre-rRNA in pre-40S particles is nucleolytically processed during translocation from the nucleus to the cytosol (Rattus norvegicus)
        
        40S ribosomal complex [cytosol] (Rattus norvegicus)
        
        RPS29 [cytosol] (Rattus norvegicus)

External Reference Information

External Reference

UniProt:P62275

Reference Genes

BioGPS Gene:25348

ENSEMBL:ENSRNOG00000004196

ENSEMBL:ENSRNOG00000004196.8

ENSEMBL:ENSRNOG00000028939

ENSEMBL:ENSRNOG00000028939.5

ENSEMBL:ENSRNOG00000029443

ENSEMBL:ENSRNOG00000032542

ENSEMBL:ENSRNOG00055008896

ENSEMBL:ENSRNOG00055023956

ENSEMBL:ENSRNOG00055025614

ENSEMBL:ENSRNOG00055029270

ENSEMBL:ENSRNOG00060006191

ENSEMBL:ENSRNOG00060027659

ENSEMBL:ENSRNOG00060030916

ENSEMBL:ENSRNOG00060032249

ENSEMBL:ENSRNOG00065006539

ENSEMBL:ENSRNOG00065025281

ENSEMBL:ENSRNOG00065027296

KEGG Gene (Rattus norvegicus):108350501

KEGG Gene (Rattus norvegicus):108351482

KEGG Gene (Rattus norvegicus):108352650

KEGG Gene (Rattus norvegicus):25348

Monarch:25348

NCBI Gene:25348

UCSC:P62275

Reference Transcript

Other Identifiers

10765811

108348980

108352650

10850758

10890238

10896225

1387890_at

17778278

17822248

25348

5766106

5799117

5960301

6159995

6190492

6289129

6364367

6386975

6433490

6457068

6513593

6553966

6669984

A_64_P049931

A_64_P049933

GE22145

GO:0003735

GO:0005198

GO:0005840

GO:0006412

GO:0008270

GO:0043226

ILMN_1357393

PH_rn_0001750

X59051cds_s_at

rc_AA965264_at

Participates

as a component of

40S ribosomal complex [cytosol] (Rattus norvegicus)

Other forms of this molecule

RPS29 [nucleoplasm]

Inferred From

RPS29 [cytosol] (Homo sapiens)

Cross References

RefSeq

XP_017454537.1, XP_017458926.1, XP_017458134.1, XP_017450716.1, XP_017460190.1, XP_017447740.1, NP_037008.1

Ensembl

ENSRNOG00000004196, ENSRNOG00000028939, ENSRNOP00000044909, ENSRNOT00000041384, ENSRNOP00000005577, ENSRNOT00000005577

PRO

P62275

RGD

3596

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