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Rpl39 [cytosol]
Stable Identifier
R-RNO-72472
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
cytosol
Synonyms
RPL39, P62893
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Rattus norvegicus)
Nonsense-Mediated Decay (NMD) (Rattus norvegicus)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Rattus norvegicus)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Rattus norvegicus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
SMG6 hydrolyzes mRNA with premature termination codon (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Rattus norvegicus)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Rattus norvegicus)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Rattus norvegicus)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
rRNA processing (Rattus norvegicus)
rRNA processing in the nucleus and cytosol (Rattus norvegicus)
Major pathway of rRNA processing in the nucleolus and cytosol (Rattus norvegicus)
12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
Metabolism of proteins (Rattus norvegicus)
Translation (Rattus norvegicus)
Eukaryotic Translation Initiation (Rattus norvegicus)
Cap-dependent Translation Initiation (Rattus norvegicus)
Formation of a pool of free 40S subunits (Rattus norvegicus)
Release of 40S and 60S subunits from the 80S ribosome (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
GTP hydrolysis and joining of the 60S ribosomal subunit (Rattus norvegicus)
The 60S subunit joins the translation initiation complex (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
80S:Met-tRNAi:mRNA:eIF5B:GTP [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
eIF5B:GTP is hydrolyzed and released (Rattus norvegicus)
80S:Met-tRNAi:mRNA [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
80S:Met-tRNAi:mRNA:eIF5B:GTP [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
L13a-mediated translational silencing of Ceruloplasmin expression (Rattus norvegicus)
Dissociation of L13a from the 60s ribosomal subunit (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
60s ribosomal complex lacking L13a subunit [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
SRP-dependent cotranslational protein targeting to membrane (Rattus norvegicus)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Rattus norvegicus)
SRP:polypeptide+signal:ribosome [cytosol] (Rattus norvegicus)
ribosome:mRNA:polypeptide+signal [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
ribosome:mRNA:polypeptide+signal [cytosol] (Rattus norvegicus)
80S ribosome [cytosol] (Rattus norvegicus)
60S ribosomal complex [cytosol] (Rattus norvegicus)
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Rpl39 [cytosol] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P62893
Gene Names
Rpl39
Reference Genes
BioGPS Gene:25347 Rpl39
ENSEMBL:ENSRNOG00000029267
ENSEMBL:ENSRNOG00000029267.2 Rpl39
ENSEMBL:ENSRNOG00000034237
ENSEMBL:ENSRNOG00000034237.3 Rpl39
ENSEMBL:ENSRNOG00000043348
ENSEMBL:ENSRNOG00000048073
ENSEMBL:ENSRNOG00000048073.2 Rpl39
ENSEMBL:ENSRNOG00000050393
ENSEMBL:ENSRNOG00000050393.2 Rpl39
ENSEMBL:ENSRNOG00000067660
ENSEMBL:ENSRNOG00000067660.1 Rpl39
ENSEMBL:ENSRNOG00055008771
ENSEMBL:ENSRNOG00055009210
ENSEMBL:ENSRNOG00055023110
ENSEMBL:ENSRNOG00055025936
ENSEMBL:ENSRNOG00055027780
ENSEMBL:ENSRNOG00055029405
ENSEMBL:ENSRNOG00055030736
ENSEMBL:ENSRNOG00060007696
ENSEMBL:ENSRNOG00060009753
ENSEMBL:ENSRNOG00060020780
ENSEMBL:ENSRNOG00060022808
ENSEMBL:ENSRNOG00060029471
ENSEMBL:ENSRNOG00060031243
ENSEMBL:ENSRNOG00060031377
ENSEMBL:ENSRNOG00065006928
ENSEMBL:ENSRNOG00065010244
ENSEMBL:ENSRNOG00065014186
ENSEMBL:ENSRNOG00065023966
ENSEMBL:ENSRNOG00065028942
ENSEMBL:ENSRNOG00065033698
KEGG Gene (Rattus norvegicus):103690821 Rpl39
KEGG Gene (Rattus norvegicus):103692785 Rpl39
KEGG Gene (Rattus norvegicus):103693375 Rpl39
KEGG Gene (Rattus norvegicus):103694169 Rpl39
KEGG Gene (Rattus norvegicus):103694404 Rpl39
KEGG Gene (Rattus norvegicus):25347 Rpl39
Monarch:25347 Rpl39
NCBI Gene:25347 Rpl39
UCSC:P62893 Rpl39
Reference Transcript
RefSeq:XM_008773208.2 Rpl39
RefSeq:XM_008772938.2 Rpl39
RefSeq:XM_008770106.2 Rpl39
RefSeq:XM_008770613.2 Rpl39
RefSeq:XM_008768019.2 Rpl39
RefSeq:XM_008774092.1 Rpl39
RefSeq:NM_012875.2 Rpl39
RefSeq:XM_008771991.2 Rpl39
RefSeq:XM_008774939.2 Rpl39
RefSeq:XM_008765200.2 Rpl39
RefSeq:XM_008758398.2 Rpl39
Other Identifiers
103690821
10776291
10782917
10803301
10829688
10895022
10932013
10937820
17693886
17701751
17724936
17827731
17870602
17877129
25347
5658151
5677546
5697862
5723000
5729679
5920871
5953652
6015727
6032115
6064663
6064764
6169784
6184456
6204317
6277467
6495952
6496433
6513390
6517156
6531802
6579704
6582712
A_43_P11597
A_44_P1031534
A_64_P011311
GE20026
GO:0003735
GO:0005198
GO:0005840
GO:0006412
GO:0043226
ILMN_1366154
PH_rn_0001749
rc_AI171085_at
Participates
as a member of
RPL39,RPL39L [cytosol] (Rattus norvegicus)
Inferred From
RPL39 [cytosol]
(Homo sapiens)
Cross References
RefSeq
XP_008768328.1
,
XP_008756620.1
,
XP_008772314.1
,
XP_008768835.1
,
XP_008770213.1
,
XP_008773161.1
,
XP_008766241.1
,
XP_008771430.1
,
XP_008763422.1
,
XP_008771160.1
,
NP_037007.1
Ensembl
ENSRNOG00000067660
,
ENSRNOP00000041329
,
ENSRNOT00000051137
,
ENSRNOG00000029267
,
ENSRNOT00000050345
,
ENSRNOP00000055790
,
ENSRNOG00000034237
,
ENSRNOG00000048073
,
ENSRNOG00000050393
,
ENSRNOP00000049665
,
ENSRNOT00000046536
,
ENSRNOP00000044553
,
ENSRNOT00000043244
,
ENSRNOP00000049713
,
ENSRNOT00000059010
PRO
P62893
RGD
9350894
,
3593
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