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LSM5 [cytosol]
Stable Identifier
R-SCE-429839
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
cytosol
Synonyms
LSM5, P40089
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Saccharomyces cerevisiae)
Deadenylation-dependent mRNA decay (Saccharomyces cerevisiae)
mRNA decay by 5' to 3' exoribonuclease (Saccharomyces cerevisiae)
DCP1-DCP2 complex decaps mRNA (Saccharomyces cerevisiae)
Deadenylated mRNA:Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM5 [cytosol] (Saccharomyces cerevisiae)
Decapped mRNA:LSM1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM5 [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex binds deadenylated mRNA (Saccharomyces cerevisiae)
Deadenylated mRNA:Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM5 [cytosol] (Saccharomyces cerevisiae)
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
LSM5 [cytosol] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P40089
Gene Names
LSM5
Reference Genes
BioGPS Gene:856889 LSM5
ENSEMBL:YER146W
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YER146W LSM5
Monarch:856889 LSM5
NCBI Gene:856889 LSM5
SGD:YER146W
Reference Transcript
RefSeq:NM_001179036.1 LSM5
Other Identifiers
1771836_at
5586_at
856889
GO:0000290
GO:0000398
GO:0000932
GO:0000956
GO:0003674
GO:0003723
GO:0005515
GO:0005575
GO:0005634
GO:0005681
GO:0005688
GO:0005730
GO:0005732
GO:0005737
GO:0006364
GO:0006397
GO:0006401
GO:0006417
GO:0008033
GO:0008150
GO:0008380
GO:0009414
GO:0009737
GO:0032991
GO:0042221
GO:0046540
GO:1990726
GO:1990904
Participates
as a component of
Lsm1-7 Complex [cytosol] (Saccharomyces cerevisiae)
Inferred From
LSM5 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_011073.1
OpenTargets
ENSG00000106355
PRO
P40089
PDB
4M7A
,
4C92
,
5ZWM
,
4C8Q
,
5GAN
,
6ASO
,
5VSU
,
4M7D
,
5ZWO
,
4M75
,
5NRL
,
4M77
,
3JCM
,
4M78
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P22147 XRN1
2
XRN1 [nucleoplasm]
(R-SCE-6791205)
XRN1_YEAST [cytosol]
(R-SCE-429980)
0.688
13
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