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GTF2B [nucleoplasm]
Stable Identifier
R-SCE-65888
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
nucleoplasm
Synonyms
P29055
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Saccharomyces cerevisiae)
RNA Polymerase II Transcription (Saccharomyces cerevisiae)
RNA Polymerase II Pre-transcription Events (Saccharomyces cerevisiae)
Abortive Initiation Before Second Transition (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Pol II Promoter Escape Complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Abortive initiation after formation of the first phosphodiester bond (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Fall Back to Closed Pre-initiation Complex (Saccharomyces cerevisiae)
pol II closed pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II open pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Transcription Initiation And Promoter Clearance (Saccharomyces cerevisiae)
RNA Polymerase II Promoter Escape (Saccharomyces cerevisiae)
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Addition of the third nucleotide on the nascent transcript (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Unwinding DNA for the nascent transcript (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Unwinding of DNA for the Nascent Transcript: Second Transition (Saccharomyces cerevisiae)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Promoter Opening: First Transition (Saccharomyces cerevisiae)
pol II closed pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II open pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Transcription Initiation (Saccharomyces cerevisiae)
NTP Binds Active Site of RNA Polymerase II (Saccharomyces cerevisiae)
Pol II initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II open pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Newly Formed Phosphodiester Bond Stabilized and PPi Released (Saccharomyces cerevisiae)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP (Saccharomyces cerevisiae)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Pol II initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening (Saccharomyces cerevisiae)
Binding of TFIIA and TFIIB to the pol II promoter:TFIID complex (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Binding of TFIIE to the growing preinitiation complex (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Formation of the closed pre-initiation complex (Saccharomyces cerevisiae)
pol II closed pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Recruitment of RNA Polymerase II Holoenzyme by TFIIF to the pol II promoter:TFIID:TFIIA:TFIIB complex (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II transcribes snRNA genes (Saccharomyces cerevisiae)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Saccharomyces cerevisiae)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Saccharomyces cerevisiae)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P29055
Reference Genes
BioGPS Gene:856201
dbSNP Gene:856201
ENSEMBL:YPR086W
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YPR086W
Monarch:856201
NCBI Gene:856201
SGD:YPR086W
Reference Transcript
RefSeq:NM_001184183.1
Other Identifiers
1772750_at
3K1F
3K7A
4932.YPR086W
4BBR
4BBS
4V1N
4V1O
5FMF
5FYW
5FZ5
5SVA
7662_at
AAA35126.1
AAB68135.1
AAT93251.1
DAA11504.1
EntrezGene:856201
EntrezGene:SUA7
GO:0000993
GO:0001113
GO:0001129
GO:0001139
GO:0001174
GO:0003674
GO:0005575
GO:0005634
GO:0006352
GO:0006355
GO:0006366
GO:0008134
GO:0008150
GO:0017025
GO:0019899
GO:0043167
GO:0046872
GO:0051123
GO:0070897
GO:0097550
GO:2000679
IPR000812
IPR013137
IPR013150
IPR013763
IPR023486
IPR036915
NM_001184183.1
NP_015411.1
PF00382
PF08271
PR00685
SM00385
UPI000005314D
YPR086W
YPR086W_mRNA
Participant Of
hasComponent
Initiation factors:CDK7:snRNA gene [nucleoplasm]
Pol II initiation complex [nucleoplasm]
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm]
pol II open pre-initiation complex [nucleoplasm]
Pol II Promoter Escape Complex [nucleoplasm]
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm]
pol II transcription complex [nucleoplasm]
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm]
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm]
output
Abortive initiation after formation of the first phosphodiester bond
Abortive Initiation Before Second Transition
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition
input
Binding of TFIIA and TFIIB to the pol II promoter:TFIID complex
Inferred From
GTF2B [nucleoplasm] (Homo sapiens)
Cross References
RefSeq
NP_015411.1
PRO
P29055
PDB
6GYM
,
4V1O
,
4BBS
,
6GYK
,
3K7A
,
5OQM
,
5SVA
,
3K1F
,
4V1N
,
6GYL
,
5OQJ
,
5FYW
,
5FZ5
,
5FMF
,
4BBR
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P20434 RPB5
2
POLR2E [nucleoplasm]
(R-SCE-83713)
RPB5_YEAST [nucleoplasm]
(R-SCE-111833)
0.736
4
UniProt:P10591
23
HSPA6 [ficolin-1-rich granule lumen]
(R-SCE-6801512-2)
HSPA8 [cytosol]
(R-SCE-264476-2)
HSPA1A [ficolin-1-rich granule lumen]
(R-SCE-6801496-2)
HSPA8 [ficolin-1-rich granule lumen]
(R-SCE-6801494-2)
HSPA1A [extracellular region]
(R-SCE-6805872-2)
HSPA6 [extracellular region]
(R-SCE-6806500-2)
HSPA8 [extracellular region]
(R-SCE-6805936-2)
HSPA8 [secretory granule lumen]
(R-SCE-6801530-2)
HSPA6 [secretory granule lumen]
(R-SCE-6801472-2)
HSPA8 [nucleoplasm]
(R-SCE-5082380-2)
HSPA2 [nucleoplasm]
(R-SCE-912480-2)
HSPA1L [nucleoplasm]
(R-SCE-5082367-2)
HSPA1A [nucleoplasm]
(R-SCE-6792605-2)
HSPA6 [nucleoplasm]
(R-SCE-5252088-2)
HSPA13 [nucleoplasm]
(R-SCE-5252009-2)
HSPA7 [nucleoplasm]
(R-SCE-5252047-2)
HSPA1L [cytosol]
(R-SCE-3371410-2)
HSPA2 [cytosol]
(R-SCE-3371408-2)
HSPA13 [cytosol]
(R-SCE-5251981-2)
HSPA6 [cytosol]
(R-SCE-3371521-2)
HSPA7 [cytosol]
(R-SCE-5251954-2)
HSPA1A [cytosol]
(R-SCE-6792602-2)
Me3K561-HSPA8 [nucleoplasm]
(R-SCE-8932217-2)
0.527
2
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