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upf1 [cytosol]
Stable Identifier
R-SPO-927734
Type
Protein [EntityWithAccessionedSequence]
Species
Schizosaccharomyces pombe
Compartment
cytosol
Synonyms
UPF1, Q09820
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Schizosaccharomyces pombe)
Nonsense-Mediated Decay (NMD) (Schizosaccharomyces pombe)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Schizosaccharomyces pombe)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Schizosaccharomyces pombe)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Schizosaccharomyces pombe)
upf1 [cytosol] (Schizosaccharomyces pombe)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Schizosaccharomyces pombe)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Schizosaccharomyces pombe)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Schizosaccharomyces pombe)
upf1 [cytosol] (Schizosaccharomyces pombe)
upf1 [cytosol] (Schizosaccharomyces pombe)
External Reference Information
External Reference
UniProt:Q09820
Gene Names
upf1
Reference Genes
BioGPS Gene:2542327 upf1
ENSEMBL:SPAC16C9.06c
KEGG:spo:2542327 upf1
Monarch:2542327 upf1
NCBI Gene:2542327 upf1
PomBase:SPAC16C9.06c
UCSC:Q09820 upf1
Reference Transcript
RefSeq:NM_001018477.2 upf1
Participates
as a component of
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Schizosaccharomyces pombe)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Schizosaccharomyces pombe)
as an input of
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Schizosaccharomyces pombe)
Other forms of this molecule
phospho-upf1 [cytosol]
Inferred From
UPF1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_593080.1
PRO
Q09820
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