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UPF3B [nucleoplasm]
Stable Identifier
R-SSC-156776
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
nucleoplasm
Synonyms
F1RUA3
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Sus scrofa)
RNA Polymerase II Transcription (Sus scrofa)
RNA Polymerase II Transcription Termination (Sus scrofa)
Cleavage of mRNA at the 3'-end (Sus scrofa)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Metabolism of RNA (Sus scrofa)
Processing of Capped Intron-Containing Pre-mRNA (Sus scrofa)
Transport of Mature Transcript to Cytoplasm (Sus scrofa)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Sus scrofa)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Sus scrofa)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Sus scrofa)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Transport of the export-competent mRNP complex through the NPC (Sus scrofa)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
mRNA 3'-end processing (Sus scrofa)
Cleavage of mRNA at the 3'-end (Sus scrofa)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
TREX complex binds spliced, capped mRNA:CBC:EJC cotranscriptionally (Sus scrofa)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Spliced mRNP [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
mRNA polyadenylation (Sus scrofa)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
mRNA Splicing (Sus scrofa)
mRNA Splicing - Major Pathway (Sus scrofa)
Formation of the Spliceosomal C complex containing intron lariat (Sus scrofa)
Spliceosomal B* complex [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Spliceosomal C complex [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Formation of the Spliceosomal C* complex (Sus scrofa)
Spliceosomal C complex [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Spliceosomal C* complex [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Formation of the Spliceosomal P complex and exon ligation (Sus scrofa)
Spliceosomal C* complex [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
Spliceosomal P complex [nucleoplasm] (Sus scrofa)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
UPF3B [nucleoplasm] (Sus scrofa)
External Reference Information
External Reference
UniProt:F1RUA3
Reference Genes
BioGPS Gene:414433
ENSEMBL:ENSSSCG00000012617.6
Monarch:414433
NCBI Gene:414433
UCSC:F1RUA3
Reference Transcript
RefSeq:XM_003135341.4
Participates
as a component of
Spliceosomal B* complex [nucleoplasm] (Sus scrofa)
Spliceosomal C complex [nucleoplasm] (Sus scrofa)
Spliceosomal C* complex [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
EJC [nucleoplasm] (Sus scrofa)
Other forms of this molecule
UPF3B [cytosol]
Inferred From
UPF3B [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_003135389.1
VGNC
94720
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