Reactome | H3-3A [nucleoplasm]

H3-3A [nucleoplasm]

Stable Identifier

R-SSC-427324

Type

Protein [EntityWithAccessionedSequence]

Species

Sus scrofa

Compartment

nucleoplasm

Synonyms

Me2K-10-H3F3A, Q71LE2

Locations in the PathwayBrowser

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Cellular responses to external stimuli (Sus scrofa)

- Cellular responses to stress (Sus scrofa)
  - Cellular Senescence (Sus scrofa)
    - Senescence-Associated Secretory Phenotype (SASP) (Sus scrofa)
      - EHMT1:EHMT2 methylates IL6 promoter (Sus scrofa)
        
        IL6 gene:Nucleosome-H3K9Me2 [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
      - EHMT1:EHMT2 methylates IL8 promoter (Sus scrofa)
        
        IL8 gene:Nucleosome-H3K9Me2 [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)

Gene expression (Transcription) (Sus scrofa)

- Epigenetic regulation of gene expression (Sus scrofa)
  - Negative epigenetic regulation of rRNA expression (Sus scrofa)
    - NoRC negatively regulates rRNA expression (Sus scrofa)
      - MBD2 binds methylcytosine in chromatin (Sus scrofa)
        
        Chromatin (H3K9me2, 5mC):MBD2 [nucleoplasm] (Sus scrofa)
        
        Chromatin with H3K9me2, 5mC [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
        
        Chromatin with H3K9me2, 5mC [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
    - SIRT1 negatively regulates rRNA expression (Sus scrofa)
      - Formation of energy-dependent Nucleolar Silencing Complex (eNoSC) (Sus scrofa)
        
        Chromatin (H3K9me2) [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
        
        eNoSC [nucleoplasm] (Sus scrofa)
        
        Chromatin (H3K9me2) [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
      - eNoSC deacetylates histone H3 (Sus scrofa)
        
        eNoSC [nucleoplasm] (Sus scrofa)
        
        Chromatin (H3K9me2) [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
      - eNoSC dimethylates histone H3 at lysine-9 (Sus scrofa)
        
        Chromatin (H3K9me2) [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
        
        eNoSC [nucleoplasm] (Sus scrofa)
        
        Chromatin (H3K9me2) [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
- RNA Polymerase I Transcription (Sus scrofa)
  - RNA Polymerase I Promoter Clearance (Sus scrofa)
    - RNA Polymerase I Promoter Escape (Sus scrofa)
      - Elongation of pre-rRNA transcript (Sus scrofa)
        
        Chromatin (H3K9me2):CBX3 [nucleoplasm] (Sus scrofa)
        
        Chromatin (H3K9me2) [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)
    - RNA Polymerase I Promoter Opening (Sus scrofa)
      - UBF-1 Binds rDNA Promoter (Sus scrofa)
        
        Chromatin (H3K9me2, 5mC):MBD2 [nucleoplasm] (Sus scrofa)
        
        Chromatin with H3K9me2, 5mC [nucleoplasm] (Sus scrofa)
        
        Nucleosome with H3K9me2 [nucleoplasm] (Sus scrofa)
        
        Histone H3 dimethylated at lysine-9 [nucleoplasm] (Sus scrofa)
        
        H3-3A [nucleoplasm] (Sus scrofa)

External Reference Information

External Reference

UniProt:Q71LE2

Gene Names

H3-3A

Reference Genes

BioGPS Gene:100521680 H3-3A

BioGPS Gene:396970 H3-3A

ENSEMBL:ENSSSCG00000017202

ENSEMBL:ENSSSCG00000023971 H3-3A

ENSEMBL:ENSSSCG00005011893 H3-3A

ENSEMBL:ENSSSCG00015036810 H3-3A

ENSEMBL:ENSSSCG00015048325 H3-3A

ENSEMBL:ENSSSCG00025037271 H3-3A

ENSEMBL:ENSSSCG00030005134 H3-3A

ENSEMBL:ENSSSCG00035048727 H3-3A

ENSEMBL:ENSSSCG00035053743 H3-3A

ENSEMBL:ENSSSCG00040044657 H3-3A

ENSEMBL:ENSSSCG00040071581 H3-3A

ENSEMBL:ENSSSCG00045029396 H3-3A

ENSEMBL:ENSSSCG00045038628 H3-3A

ENSEMBL:ENSSSCG00050017758 H3-3A

ENSEMBL:ENSSSCG00050070605 H3-3A

ENSEMBL:ENSSSCG00055006012 H3-3A

ENSEMBL:ENSSSCG00055013826 H3-3A

ENSEMBL:ENSSSCG00060029017 H3-3A

ENSEMBL:ENSSSCG00060069290 H3-3A

ENSEMBL:ENSSSCG00065030240 H3-3A

ENSEMBL:ENSSSCG00065055858 H3-3A

ENSEMBL:ENSSSCG00070007464 H3-3A

ENSEMBL:ENSSSCG00070020711 H3-3A

KEGG Gene (Sus scrofa):100521680 H3-3A

KEGG Gene (Sus scrofa):396970 H3-3A

Monarch:100521680 H3-3A

Monarch:396970 H3-3A

NCBI Gene:100521680 H3-3A

NCBI Gene:396970 H3-3A

Reference Transcript

Other Identifiers

100521680

396970

GO:0000003

GO:0000228

GO:0000784

GO:0000786

GO:0000788

GO:0000978

GO:0000979

GO:0001649

GO:0001740

GO:0003674

GO:0003677

GO:0005575

GO:0005622

GO:0005634

GO:0005694

GO:0006334

GO:0006336

GO:0006997

GO:0007283

GO:0007286

GO:0007338

GO:0007566

GO:0008150

GO:0008283

GO:0008584

GO:0022607

GO:0030154

GO:0030307

GO:0031492

GO:0031508

GO:0031509

GO:0032991

GO:0035264

GO:0040007

GO:0042692

GO:0043226

GO:0046982

GO:0048477

GO:0048856

GO:0051276

GO:0065003

GO:0090230

GO:1902340

Ssc.10940.1.S1_at

Ssc.11548.1.S1_at

Ssc.11548.1.S2_at

Participant Of

hasMember

Histone H3 dimethylated at lysine-9 [nucleoplasm]

Other forms of this molecule

H3-3A [nucleoplasm]

Inferred From

Me2K-10-H3F3A [nucleoplasm] (Homo sapiens)

Modified Residues

Name

N6,N6-dimethyl-L-lysine at 10 (in Homo sapiens)

Coordinate

PsiMod Name

N6,N6-dimethyl-L-lysine [MOD:00084]

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to N6,N6-dimethyl-L-lysine.

Cross References

RefSeq

NP_999095.1, XP_003131242.1

Target Pathogen

57c0ab45be737e1cc0a9d2f0, 57c0aa24be737e1cc0a9c2e3, 5b354852be737e166372eaa9, 57c5e634be737e5a0cb4cb11, 57c0ab9bbe737e1cc0a9d7f0, 5b354852be737e166372e85a, 5b2801b2be737e35a6dea8d6, 5b2801b3be737e35a6df0ac2, 5b2801b3be737e35a6df1873, 5b2801b2be737e35a6de88ae, 5b2801b3be737e35a6df0ddc, 5b2801b2be737e35a6dea64d, 5b2801b2be737e35a6dea9b5, 5b354852be737e166372eb9b, 57cdcfdfbe737e0b49b9a3bb, 57c5eaa7be737e5a0cb4f982, 5b354852be737e166372e957, 5b354852be737e166372eaa2, 57c08b76be737e1cc0a95c6a

OpenTargets

ENSG00000163041

Ensembl

ENSSSCP00000038252, ENSSSCT00000049322, ENSSSCG00000017202, ENSSSCT00000018727, ENSSSCG00000023971, ENSSSCP00000018225