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APEX1 [nucleoplasm]
Stable Identifier
R-SSC-50119
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
nucleoplasm
Synonyms
A0A287BTC2
Locations in the PathwayBrowser
Expand all
DNA Repair (Sus scrofa)
Base Excision Repair (Sus scrofa)
Resolution of Abasic Sites (AP sites) (Sus scrofa)
APEX1 mediates endonucleolytic cleavage at the 5' side of the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Displacement of DNA glycosylase by APEX1 (Sus scrofa)
Displacement of MBD4 glycosylase by APEX1 at the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Displacement of MPG glycosylase by APEX1 at the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Displacement of MUTYH glycosylase by APEX1 at the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Displacement of NTHL1 glycosylase by APEX1 at the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Displacement of SMUG1 glycosylase by APEX1 at the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Displacement of TDG glycosylase by APEX1 at the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Displacement of UNG glycosylase by APEX1 at the AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Resolution of AP sites via the multiple-nucleotide patch replacement pathway (Sus scrofa)
Oxidative damage to the AP site (Sus scrofa)
APEX1:SSB(5'-ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
PCNA-Dependent Long Patch Base Excision Repair (Sus scrofa)
LIG1 binds APEX1 and PCNA at SSB (Sus scrofa)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:SSB:(3'poly-dNMP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
LIG1 bound to APEX1 and PCNA ligates SSB (Sus scrofa)
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:SSB:(3'poly-dNMP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
PCNA:POLD,POLE:RPA:RFC and FEN1 bind APEX1 (Sus scrofa)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB:APEX1:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLD,POLE-mediated DNA strand displacement synthesis (Sus scrofa)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP-displaced 5'ddRP flap)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB incorporates the first 3' dNMP and displaces 5'ddRP at SSB site (Sus scrofa)
POLB:APEX1:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB:APEX1:SSB(5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:SSB(5'-ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB-Dependent Long Patch Base Excision Repair (Sus scrofa)
PARP1,PARP2 dimers and FEN1 bind POLB and displace APEX1 from damaged AP site (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB:APEX1:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Recruitment of POLB to oxidatively damaged AP site (Sus scrofa)
APEX1:SSB(5'-ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB:APEX1:SSB(5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:SSB(5'-ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Resolution of AP sites via the single-nucleotide replacement pathway (Sus scrofa)
Abasic sugar-phosphate removal via the single-nucleotide replacement pathway (Sus scrofa)
Excision of the abasic sugar phosphate (5'dRP) residue at the single strand break (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB:APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
Recruitment of POLB to the AP site (Sus scrofa)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
POLB:APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1 [nucleoplasm] (Sus scrofa)
External Reference Information
External Reference
UniProt:A0A287BTC2
Reference Genes
ENSEMBL:ENSSSCG00000040060.2
ENSEMBL:ENSSSCG00005023304.1
Other Identifiers
100154728
GO:0000723
GO:0003677
GO:0003684
GO:0003691
GO:0003713
GO:0003824
GO:0003906
GO:0004518
GO:0004519
GO:0005634
GO:0005654
GO:0005730
GO:0005737
GO:0005739
GO:0005813
GO:0005815
GO:0005856
GO:0006281
GO:0006284
GO:0006308
GO:0006310
GO:0006351
GO:0006355
GO:0006974
GO:0008081
GO:0008296
GO:0008309
GO:0008408
GO:0012501
GO:0016071
GO:0016491
GO:0016607
GO:0016787
GO:0016890
GO:0031490
GO:0032200
GO:0042981
GO:0043226
GO:0043488
GO:0045454
GO:0045944
GO:0046872
GO:0048471
GO:0052720
GO:0080111
GO:0090580
GO:0097698
GO:0140097
GO:0140110
GO:0140431
Ssc.7943.1.S1_at
Participates
as an output of
Excision of the abasic sugar phosphate (5'dRP) residue at the single strand break (Sus scrofa)
PARP1,PARP2 dimers and FEN1 bind POLB and displace APEX1 from damaged AP site (Sus scrofa)
as a component of
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:dsDNA [nucleoplasm] (Sus scrofa)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP-displaced 5'ddRP flap)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Sus scrofa)
POLB:APEX1:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:SSB(5'-ddRP)-dsDNA [nucleoplasm] (Sus scrofa)
APEX1:AP-dsDNA [nucleoplasm] (Sus scrofa)
as an input of
Displacement of TDG glycosylase by APEX1 at the AP site (Sus scrofa)
Displacement of SMUG1 glycosylase by APEX1 at the AP site (Sus scrofa)
Displacement of UNG glycosylase by APEX1 at the AP site (Sus scrofa)
Displacement of MPG glycosylase by APEX1 at the AP site (Sus scrofa)
Displacement of MUTYH glycosylase by APEX1 at the AP site (Sus scrofa)
Displacement of NTHL1 glycosylase by APEX1 at the AP site (Sus scrofa)
Displacement of MBD4 glycosylase by APEX1 at the AP site (Sus scrofa)
Inferred From
APEX1 [nucleoplasm]
(Homo sapiens)
Cross References
Ensembl
ENSSSCP00000059451
,
ENSSSCT00000059621
,
ENSSSCG00000040060
VGNC
103896
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