Reactome | col2a1 [endoplasmic reticulum lumen]

col2a1 [endoplasmic reticulum lumen]

Stable Identifier

R-XTR-2023572

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-3Hyp-GalHyl-COL2A1(26-1487), Q6P4Z2

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q6P4Z2

Gene Names

col2a1

Reference Genes

BioGPS Gene:394828 col2a1

ENSEMBL:ENSXETG00000010655

KEGG Gene (Xenopus tropicalis):394828 col2a1

Monarch:394828 col2a1

NCBI Gene:394828 col2a1

Reference Transcript

RefSeq:NM_203889.1 col2a1

Other Identifiers

394828

GO:0000166

GO:0001501

GO:0003674

GO:0003774

GO:0003777

GO:0005198

GO:0005201

GO:0005515

GO:0005524

GO:0005575

GO:0005576

GO:0005581

GO:0005615

GO:0005622

GO:0005737

GO:0005856

GO:0005874

GO:0007018

GO:0008150

GO:0009790

GO:0030198

GO:0030199

GO:0030286

GO:0030903

GO:0031012

GO:0032991

GO:0043167

GO:0043226

GO:0046872

GO:0048856

Str.5498.1.S1_at

Str.5498.1.S2_at

Participant Of

input

hasCandidate

3,4-Hyp 5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen]

hasComponent

Other forms of this molecule

col2a1 [endoplasmic reticulum lumen]

col2a1 [extracellular region]

Inferred From

3x4Hyp-3Hyp-GalHyl-COL2A1(26-1487) [endoplasmic reticulum lumen] (Homo sapiens)

Alpha-1(II) propeptides [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_989220.1

Ensembl

ENSXETT00000043834, ENSXETP00000043834, ENSXETG00000010655