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agrn [Golgi lumen]
Stable Identifier
R-XTR-2064200
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
GlcA-Gal-Gal-Xyl-AGRN, F7C4H1
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Chondroitin sulfate/dermatan sulfate metabolism (Xenopus tropicalis)
A tetrasaccharide linker sequence is required for GAG synthesis (Xenopus tropicalis)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Xenopus tropicalis)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
agrn [Golgi lumen] (Xenopus tropicalis)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Xenopus tropicalis)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
agrn [Golgi lumen] (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
A tetrasaccharide linker sequence is required for GAG synthesis (Xenopus tropicalis)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Xenopus tropicalis)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
agrn [Golgi lumen] (Xenopus tropicalis)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Xenopus tropicalis)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Xenopus tropicalis)
agrn [Golgi lumen] (Xenopus tropicalis)
HS-GAG biosynthesis (Xenopus tropicalis)
EXT1:EXT2 transfers GlcNAc to the terminal GlcA residue (Xenopus tropicalis)
GlcA-Gal-Gal-Xyl-HS proteins [Golgi lumen] (Xenopus tropicalis)
agrn [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:F7C4H1
Gene Names
agrn
Reference Genes
ENSEMBL:ENSXETG00000001763
ENSEMBL:ENSXETG00000007178 agrn
Other Identifiers
100492176
GO:0003674
GO:0003677
GO:0005044
GO:0005509
GO:0005515
GO:0005575
GO:0005622
GO:0005634
GO:0005654
GO:0005886
GO:0006325
GO:0006338
GO:0006464
GO:0007165
GO:0007213
GO:0007267
GO:0007528
GO:0008150
GO:0009887
GO:0009888
GO:0016020
GO:0016491
GO:0016577
GO:0032452
GO:0032991
GO:0034330
GO:0034647
GO:0034721
GO:0035097
GO:0043113
GO:0043167
GO:0043226
GO:0043236
GO:0046872
GO:0048856
GO:0051213
GO:0051276
GO:0055114
StrEns.4699.1.S1_a_at
StrEns.4702.1.S1_a_at
Participant Of
hasMember
GlcA-Gal-Gal-Xyl-HS proteins [Golgi lumen]
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen]
Other forms of this molecule
agrn [plasma membrane]
agrn [lysosomal lumen]
agrn [lysosomal lumen]
agrn [plasma membrane]
agrn [plasma membrane]
agrn [plasma membrane]
agrn [plasma membrane]
agrn [plasma membrane]
agrn [plasma membrane]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [Golgi lumen]
agrn [extracellular region]
Inferred From
GlcA-Gal-Gal-Xyl-AGRN [Golgi lumen] (Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63505) at unknown position
Modification
beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
Ensembl
ENSXETT00000003664
,
ENSXETG00000001763
,
ENSXETP00000003664
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