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HS(4)-SDC1 [Golgi lumen]
Stable Identifier
R-XTR-2076593
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
F6Z9M8
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
HS-GAG biosynthesis (Xenopus tropicalis)
HS3ST1 sulfates GlcN at C3 in heparan sulfate (Xenopus tropicalis)
HS(4)-PGs [Golgi lumen] (Xenopus tropicalis)
HS(4)-SDC1 [Golgi lumen] (Xenopus tropicalis)
HS3STs sulfate GlcN at C3 in heparan sulfate (Xenopus tropicalis)
HS(4)-PGs [Golgi lumen] (Xenopus tropicalis)
HS(4)-SDC1 [Golgi lumen] (Xenopus tropicalis)
Some HSPGs are secreted to the plasma membrane (Xenopus tropicalis)
HSPGs [Golgi lumen] (Xenopus tropicalis)
HS(4)-PGs [Golgi lumen] (Xenopus tropicalis)
HS(4)-SDC1 [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:F6Z9M8
Reference Genes
ENSEMBL:ENSXETG00000008902
Other Identifiers
100145815
GO:0000166
GO:0003674
GO:0003676
GO:0003677
GO:0003887
GO:0005575
GO:0005622
GO:0006259
GO:0006281
GO:0006950
GO:0008150
GO:0009058
GO:0016035
GO:0016779
GO:0019985
GO:0032991
GO:0034641
GO:0043226
Str.27526.1.A1_at
Str.44797.1.S1_at
Participant Of
hasMember
HS(4)-PGs [Golgi lumen]
Other forms of this molecule
SDC1 [plasma membrane]
SDC1 [lysosomal lumen]
HS(6)-SDC1 [lysosomal lumen]
HS(5)-SDC1 [plasma membrane]
HS(3)-SDC1 [plasma membrane]
HS(1)-SDC1 [plasma membrane]
HS(2)-SDC1 [plasma membrane]
HS(6)-SDC1 [plasma membrane]
HS(4)-SDC1 [plasma membrane]
HS(6)-SDC1 [Golgi lumen]
HS(5)-SDC1 [Golgi lumen]
Heparan-SDC1 [Golgi lumen]
Heparan(1)-SDC1 [Golgi lumen]
Heparan(2)-SDC1 [Golgi lumen]
Heparan(3)-SDC1 [Golgi lumen]
Heparan(4)-SDC1 [Golgi lumen]
HS(1)-SDC1 [Golgi lumen]
HS(2)-SDC1 [Golgi lumen]
HS(3)-SDC1 [Golgi lumen]
GlcA-Gal-Gal-Xyl-SDC1 [Golgi lumen]
Gal-Gal-Xyl-SDC1 [Golgi lumen]
SDC1 [Golgi lumen]
Gal-Xyl-SDC1 [Golgi lumen]
XylS-SDC1 [Golgi lumen]
Inferred From
HS(4)-SDC1 [Golgi lumen] (Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63657) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
Ensembl
ENSXETT00000084743
,
ENSXETP00000086378
,
ENSXETG00000027754
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