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gtf2h4 [nucleoplasm]
Stable Identifier
R-XTR-65918
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
nucleoplasm
Synonyms
GTF2H4, Q5FV97
Locations in the PathwayBrowser
Expand all
DNA Repair (Xenopus tropicalis)
Nucleotide Excision Repair (Xenopus tropicalis)
Global Genome Nucleotide Excision Repair (GG-NER) (Xenopus tropicalis)
Dual Incision in GG-NER (Xenopus tropicalis)
5'- incision of DNA by ERCC1:ERCC4 in GG-NER (Xenopus tropicalis)
GG-NER incision complex:5'-incised damaged DNA [nucleoplasm] (Xenopus tropicalis)
TFIIH Core [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
GG-NER incision complex:Open bubble dsDNA [nucleoplasm] (Xenopus tropicalis)
GG-NER pre-incision complex:Open bubble-dsDNA [nucleoplasm] (Xenopus tropicalis)
Open bubble-dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1, PAR-PARP2:CHD1L [nucleoplasm] (Xenopus tropicalis)
TFIIH Core [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Formation of Incision Complex in GG-NER (Xenopus tropicalis)
ERCC2 and ERCC3 DNA helicases form an open bubble structure in damaged DNA (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2:CHD1L [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
TFIIH Core [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Open bubble-dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2:CHD1L [nucleoplasm] (Xenopus tropicalis)
TFIIH Core [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Recruitment of XPA and release of CAK (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
TFIIH Core [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TFIIH binds GG-NER site to form a verification complex (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Xenopus tropicalis)
Dual incision in TC-NER (Xenopus tropicalis)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Xenopus tropicalis)
TC-NER incision complex [nucleoplasm] (Xenopus tropicalis)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Xenopus tropicalis)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Xenopus tropicalis)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Xenopus tropicalis)
TC-NER pre-incision complex [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Partially open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Partially open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Xenopus tropicalis)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Partially open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Partially open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Formation of TC-NER Pre-Incision Complex (Xenopus tropicalis)
Active RNA Pol II complex transcribes lesion-containing DNA template (Xenopus tropicalis)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
ERCC6 binds stalled RNA Pol II (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
ERCC8 (CSA) binds stalled RNA Pol II (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
ERCC8:DDB1:CUL4:RBX1 ubiquitinates ERCC6 and RNA Pol II (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Pol II initiates transcription from damaged DNA template (Xenopus tropicalis)
Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
UVSSA:USP7 deubiquitinates ERCC6 (Xenopus tropicalis)
TC-NER pre-incision complex [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6 [nucleoplasm] (Xenopus tropicalis)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Gap-filling DNA repair synthesis and ligation in TC-NER (Xenopus tropicalis)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Xenopus tropicalis)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Xenopus tropicalis)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Gene expression (Transcription) (Xenopus tropicalis)
RNA Polymerase I Transcription (Xenopus tropicalis)
RNA Polymerase I Promoter Clearance (Xenopus tropicalis)
RNA Polymerase I Promoter Escape (Xenopus tropicalis)
Elongation of pre-rRNA transcript (Xenopus tropicalis)
RNA Polymerase I promoter escape complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Loss of Rrn3 from RNA Polymerase I promoter escape complex (Xenopus tropicalis)
RNA Polymerase I Transcription Initiation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase I promoter escape complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase I Transcription Termination (Xenopus tropicalis)
PTRF Binds the Polymerase I Transcription Complex/Nascent Pre rRNA Complex paused at the TTF-I:Sal Box (Xenopus tropicalis)
PTRF:Polymerase I/Nascent Pre rRNA Complex:TTF-I:Sal Box [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase I:rRNATranscript:TTF-1:Sal Box Complex [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase I promoter escape complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase I:rRNATranscript:TTF-1:Sal Box Complex [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase I promoter escape complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II Transcription (Xenopus tropicalis)
Generic Transcription Pathway (Xenopus tropicalis)
Transcriptional Regulation by TP53 (Xenopus tropicalis)
TP53 Regulates Transcription of DNA Repair Genes (Xenopus tropicalis)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Xenopus tropicalis)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Xenopus tropicalis)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Xenopus tropicalis)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Xenopus tropicalis)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Xenopus tropicalis)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Pol II CTD phosphorylation and interaction with CE (Xenopus tropicalis)
Activation of GT (Xenopus tropicalis)
RNA Pol II with phosphorylated CTD: CE complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Extrusion of 5'-end of 30 nt long transcript through the pore in Pol II complex (Xenopus tropicalis)
Pol II transcription complex containing extruded transcript to +30 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Phosphorylation (Ser5) of RNA pol II CTD (Xenopus tropicalis)
Pol II transcription complex containing extruded transcript to +30 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Pol II transcription complex with (ser5) phosphorylated CTD containing extruded transcript to +30 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II CTD (phosphorylated) binds to CE (Xenopus tropicalis)
Pol II transcription complex with (ser5) phosphorylated CTD containing extruded transcript to +30 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Pol II with phosphorylated CTD: CE complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II Pre-transcription Events (Xenopus tropicalis)
Abortive Initiation After Second Transition (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex containing 4-9 nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Fall Back to Closed Pre-initiation Complex (Xenopus tropicalis)
pol II closed pre-initiation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II open pre-initiation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II Transcription Elongation (Xenopus tropicalis)
Addition of nucleotides leads to transcript elongation (Xenopus tropicalis)
Elongation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Formation of RNA Pol II elongation complex (Xenopus tropicalis)
Recruitment of elongation factors to form elongation complex (Xenopus tropicalis)
Elongation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II Transcription Initiation And Promoter Clearance (Xenopus tropicalis)
RNA Polymerase II Promoter Escape (Xenopus tropicalis)
Addition of nucleotides 10 and 11 on the growing transcript: Third Transition (Xenopus tropicalis)
pol II transcription complex containing 11 nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex containing 9 nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Addition of nucleotides between position +11 and +30 (Xenopus tropicalis)
Pol II transcription complex containing extruded transcript to +30 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex containing 11 nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition (Xenopus tropicalis)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Addition of the third nucleotide on the nascent transcript (Xenopus tropicalis)
pol II transcription complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Unwinding DNA for the nascent transcript (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Unwinding of DNA for the Nascent Transcript: Second Transition (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II Promoter Opening: First Transition (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II closed pre-initiation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II open pre-initiation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II Transcription Initiation (Xenopus tropicalis)
NTP Binds Active Site of RNA Polymerase II (Xenopus tropicalis)
Pol II initiation complex [nucleoplasm] (Xenopus tropicalis)
RNA Polymearse II:NTP:TFIIF complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II open pre-initiation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Newly Formed Phosphodiester Bond Stabilized and PPi Released (Xenopus tropicalis)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II transcription complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP (Xenopus tropicalis)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Pol II initiation complex [nucleoplasm] (Xenopus tropicalis)
RNA Polymearse II:NTP:TFIIF complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening (Xenopus tropicalis)
Formation of the closed pre-initiation complex (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
pol II closed pre-initiation complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Metabolism of RNA (Xenopus tropicalis)
mRNA Capping (Xenopus tropicalis)
Activation of GT (Xenopus tropicalis)
RNA Pol II with phosphorylated CTD: CE complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Capping complex formation (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Capping complex (initial) [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Dissociation of transcript with 5'-GMP from GT (Xenopus tropicalis)
Capping complex (GpppN..) [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Capping complex (with freed 5'- GMP) [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Formation of the CE:GMP intermediate complex (Xenopus tropicalis)
Capping complex (intermediate) [nucleoplasm] (Xenopus tropicalis)
Covalent CE:GMP intermediate complex [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Capping complex (hydrolyzed) [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Hydrolysis of the 5'-end of the nascent transcript by the capping enzyme (Xenopus tropicalis)
Capping complex (hydrolyzed) [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Capping complex (initial) [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase II CTD (phosphorylated) binds to CE (Xenopus tropicalis)
Pol II transcription complex with (ser5) phosphorylated CTD containing extruded transcript to +30 [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
RNA Pol II with phosphorylated CTD: CE complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Transfer of GMP from the capping enzyme GT site to 5'-end of mRNA (Xenopus tropicalis)
Capping complex (intermediate) [nucleoplasm] (Xenopus tropicalis)
Covalent CE:GMP intermediate complex [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
Capping complex (GpppN..) [nucleoplasm] (Xenopus tropicalis)
CE:Pol II CTD:Spt5 complex [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
gtf2h4 [nucleoplasm] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q5FV97
Gene Names
gtf2h4
Reference Genes
BioGPS Gene:548562 gtf2h4
ENSEMBL:ENSXETG00000007263
KEGG Gene (Xenopus tropicalis):548562 gtf2h4
Monarch:548562 gtf2h4
NCBI Gene:548562 gtf2h4
Reference Transcript
RefSeq:XM_012957841.3 gtf2h4
RefSeq:XM_004911913.4 gtf2h4
RefSeq:XM_031895933.1 gtf2h4
RefSeq:XM_004911914.3 gtf2h4
RefSeq:XM_004911912.3 gtf2h4
RefSeq:NM_001015845.1 gtf2h4
Other Identifiers
101731871
548562
GO:0000439
GO:0001671
GO:0005634
GO:0006281
GO:0006289
GO:0006974
GO:0043226
GO:0098772
Participates
as a component of
TFIIH Core [nucleoplasm] (Xenopus tropicalis)
TFIIH [nucleoplasm] (Xenopus tropicalis)
Inferred From
GTF2H4 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_004911969.1
,
NP_001015845.1
,
XP_012813295.1
,
XP_031751793.1
,
XP_004911971.1
,
XP_004911970.1
Xenbase
XB-GENE-5871042
Ensembl
ENSXETT00000023332
,
ENSXETG00000007263
,
ENSXETP00000023332
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