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mtrex [nucleoplasm]
Stable Identifier
R-XTR-6791189
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
nucleoplasm
Synonyms
SKIV2L2, A0A6I8Q447
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Xenopus tropicalis)
Nuclear RNA decay (Xenopus tropicalis)
MTREX (MTR4, SKIV2L2) in PAXT:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 binds the RNA exosome (Xenopus tropicalis)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Xenopus tropicalis)
PAXT connection [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PAPBN1:RNA exosome [nucleoplasm] (Xenopus tropicalis)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Xenopus tropicalis)
PAXT connection [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
NEXT:ZC3H18:CBCA:m7GpppN-RNA binds the RNA exosome (Xenopus tropicalis)
NEXT:ZC3H18:CBCA:m7GpppN-RNA [nucleoplasm] (Xenopus tropicalis)
NEXT homodimer [nucleoplasm] (Xenopus tropicalis)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
RNA exosome:NEXT:ZC3H18:CBCA:m7GpppN-RNA [nucleoplasm] (Xenopus tropicalis)
NEXT homodimer [nucleoplasm] (Xenopus tropicalis)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
NEXT:ZC3H4:CBCA:m7GpppN-RNA binds the RNA exosome (Xenopus tropicalis)
NEXT:ZC3H4:CBCA:m7GpppN-RNA [nucleoplasm] (Xenopus tropicalis)
NEXT homodimer [nucleoplasm] (Xenopus tropicalis)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
RNA exosome:NEXT:ZC3H4:CBCA:m7GpppN-RNA [nucleoplasm] (Xenopus tropicalis)
NEXT homodimer [nucleoplasm] (Xenopus tropicalis)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
The NEXT complex binds ZC3H4:WDR82:CBCA:m7GpppN-RNA (Xenopus tropicalis)
NEXT homodimer [nucleoplasm] (Xenopus tropicalis)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
NEXT:ZC3H4:CBCA:m7GpppN-RNA [nucleoplasm] (Xenopus tropicalis)
NEXT homodimer [nucleoplasm] (Xenopus tropicalis)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
Processing of Capped Intron-Containing Pre-mRNA (Xenopus tropicalis)
mRNA Splicing (Xenopus tropicalis)
mRNA Splicing - Major Pathway (Xenopus tropicalis)
Formation of the Spliceosomal C complex containing intron lariat (Xenopus tropicalis)
Spliceosomal B* complex [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
Spliceosomal C complex [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
Formation of the Spliceosomal P complex and exon ligation (Xenopus tropicalis)
Spliceosomal C* complex [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
rRNA processing (Xenopus tropicalis)
rRNA processing in the nucleus and cytosol (Xenopus tropicalis)
Major pathway of rRNA processing in the nucleolus and cytosol (Xenopus tropicalis)
12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Xenopus tropicalis)
EXOSC10:C1D:MPHOSPH6:SKIV2L2:Exosome [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
mtrex [nucleoplasm] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:A0A6I8Q447
Gene Names
mtrex
Reference Genes
BioGPS Gene:100496866 mtrex
ENSEMBL:ENSXETG00000032798
KEGG:xtr:100496866 mtrex
Monarch:100496866 mtrex
NCBI Gene:100496866 mtrex
UCSC:A0A6I8Q447 mtrex
Reference Transcript
RefSeq:XM_004910353.3 mtrex
RefSeq:XM_002941111.5 mtrex
Other Identifiers
100496866
GO:0000166
GO:0000460
GO:0003676
GO:0003723
GO:0003724
GO:0003824
GO:0004386
GO:0005524
GO:0005634
GO:0005654
GO:0005681
GO:0005730
GO:0006364
GO:0006397
GO:0006401
GO:0006974
GO:0008380
GO:0016071
GO:0016607
GO:0016787
GO:0031499
GO:0140098
GO:0140657
Participates
as a component of
EXOSC10:C1D:MPHOSPH6:SKIV2L2:Exosome [nucleoplasm] (Xenopus tropicalis)
PAXT connection [nucleoplasm] (Xenopus tropicalis)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Xenopus tropicalis)
Spliceosomal Pre-B complex [nucleoplasm] (Xenopus tropicalis)
Spliceosomal B complex [nucleoplasm] (Xenopus tropicalis)
Spliceosomal Bact complex [nucleoplasm] (Xenopus tropicalis)
Spliceosomal B* complex [nucleoplasm] (Xenopus tropicalis)
Spliceosomal C complex [nucleoplasm] (Xenopus tropicalis)
Spliceosomal C* complex [nucleoplasm] (Xenopus tropicalis)
as an output of
Formation of the Spliceosomal P complex and exon ligation (Xenopus tropicalis)
This entity regulates
Positively
12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA
(Xenopus tropicalis)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA
(Xenopus tropicalis)
Inferred From
SKIV2L2 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_004910410.1
,
XP_002941157.1
ENSEMBL
ENSXETP00000062879
,
ENSXETG00000032798
,
ENSXETT00000064922
Xenbase
XB-GENE-1013876
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