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smg1 [cytosol]
Stable Identifier
R-XTR-927760
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
cytosol
Synonyms
SMG1, A0A6I8QIW8
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Xenopus tropicalis)
Nonsense-Mediated Decay (NMD) (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Xenopus tropicalis)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg1 [cytosol] (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg1 [cytosol] (Xenopus tropicalis)
smg1 [cytosol] (Xenopus tropicalis)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg1 [cytosol] (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg1 [cytosol] (Xenopus tropicalis)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg1 [cytosol] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:A0A6I8QIW8
Gene Names
smg1
Reference Genes
ENSEMBL:ENSXETG00000036169
KEGG Gene (Xenopus tropicalis):100145499 smg1
Reference Transcript
RefSeq:XM_002932221.5 smg1
Other Identifiers
100145499
GO:0000166
GO:0000184
GO:0003824
GO:0004674
GO:0005524
GO:0016071
GO:0016301
GO:0016310
GO:0016740
GO:0140096
Participates
as a component of
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
Inferred From
SMG1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
XP_002932267.3
Xenbase
XB-GENE-489705
Ensembl
ENSXETT00000083998
,
ENSXETP00000069294
,
ENSXETG00000036169
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