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smg9 [cytosol]
Stable Identifier
R-XTR-927812
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
cytosol
Synonyms
SMG9, B5DDX6
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Xenopus tropicalis)
Nonsense-Mediated Decay (NMD) (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Xenopus tropicalis)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg9 [cytosol] (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg9 [cytosol] (Xenopus tropicalis)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg9 [cytosol] (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg9 [cytosol] (Xenopus tropicalis)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
smg9 [cytosol] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:B5DDX6
Gene Names
smg9
Reference Genes
BioGPS Gene:100216177 smg9
ENSEMBL:ENSXETG00000004098
KEGG Gene (Xenopus tropicalis):100216177 smg9
Monarch:100216177 smg9
NCBI Gene:100216177 smg9
Reference Transcript
RefSeq:NM_001142146.1 smg9
RefSeq:XM_012966229.2 smg9
RefSeq:XM_012966230.2 smg9
Other Identifiers
100216177
GO:0003755
GO:0003824
GO:0016020
GO:0016853
GO:0140096
Participates
as a component of
SMG1:SMG8:SMG9 Complex [cytosol] (Xenopus tropicalis)
Inferred From
SMG9 [cytosol]
(Homo sapiens)
Cross References
RefSeq
XP_012821684.1
,
XP_012821683.1
,
NP_001135618.1
Ensembl
ENSXETP00000008862
,
ENSXETT00000008862
,
ENSXETG00000004098
Xenbase
XB-GENE-990837
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