Reactome: A Curated Pathway Database

Linking to Reactome

Linking to Reactome can be achieved by creating URLs containing the name of and an identifier from an “external” database in the following format:

http://www.reactome.org/content/query?cluster=true&q=identifier

Click here to see the external databases and list identifiers available in the current release of Reactome

Below are few concrete examples

  • UniProt accession numbers (the ‘AC’ line, preferred) and identifiers (the ‘ID’ line), e.g. UNIPROT:P30304

    http://www.reactome.org/content/query?cluster=true&q=P30304

  • ChEBI identifiers, e.g. CHEBI:15422

    http://www.reactome.org/content/query?cluster=true&q=15422

  • COMPOUND identifiers, e.g. COMPOUND:C00002

    http://www.reactome.org/content/query?cluster=true&q=C00002

  • Gene Ontology (GO) accession numbers, e.g. GO:0030060

    http://www.reactome.org/content/query?cluster=true&q=0030060

  • Enzyme Classification (EC) numbers, e.g. EC:1.1.1.37

    http://www.reactome.org/content/query?cluster=true&q=1.1.1.37

  • Entrez Gene, e.g. Entrez Gene:4171

    http://www.reactome.org/content/query?cluster=true&q=4171

  • Reactome, e.g. Reactome:REACT_1

    http://www.reactome.org/content/query?cluster=true&q=REACT_1