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ALYREF [nucleoplasm]
Stable Identifier
R-BTA-156649
Type
Protein [EntityWithAccessionedSequence]
Species
Bos taurus
Compartment
nucleoplasm
Synonyms
ALYREF, Q3T0I4
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Bos taurus)
RNA Polymerase II Transcription (Bos taurus)
RNA Polymerase II Transcription Termination (Bos taurus)
Cleavage of mRNA at the 3'-end (Bos taurus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (DDX39B:ATP) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (DDX39B:ATP) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Metabolism of RNA (Bos taurus)
Processing of Capped Intron-Containing Pre-mRNA (Bos taurus)
Transport of Mature Transcript to Cytoplasm (Bos taurus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Bos taurus)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Bos taurus)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Bos taurus)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (minus DDX39B) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (DDX39B:ATP) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Transport of the export-competent mRNP complex through the NPC (Bos taurus)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Transport of Mature mRNAs Derived from Intronless Transcripts (Bos taurus)
Transport of Mature mRNA Derived from an Intronless Transcript (Bos taurus)
Docking of the Mature intronless derived transcript derived mRNA, TAP and Aly/Ref at the NPC (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Transport of the Mature intronless transcript derived mRNA:TAP:Aly/Ref Complex through the NPC (Bos taurus)
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Transport of the SLBP Dependant Mature mRNA (Bos taurus)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Transport of the Mature IntronlessTranscript Derived Histone mRNA:SLBP:TAP:Aly/Ref complex through the NPC (Bos taurus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Transport of the SLBP independent Mature mRNA (Bos taurus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Transport of the Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref Complex through the NPC (Bos taurus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
mRNA 3'-end processing (Bos taurus)
Cleavage of mRNA at the 3'-end (Bos taurus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (DDX39B:ATP) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (DDX39B:ATP) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
mRNA polyadenylation (Bos taurus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (DDX39B:ATP) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
TREX (DDX39B:ATP) [nucleoplasm] (Bos taurus)
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
mRNA Splicing (Bos taurus)
mRNA Splicing - Major Pathway (Bos taurus)
Formation of the Spliceosomal Bact complex (Bos taurus)
Spliceosomal B complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Spliceosomal Bact complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Formation of the Spliceosomal C complex containing intron lariat (Bos taurus)
Spliceosomal B* complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Spliceosomal C complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Formation of the Spliceosomal C* complex (Bos taurus)
Spliceosomal C complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Spliceosomal C* complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Formation of the Spliceosomal P complex and exon ligation (Bos taurus)
Spliceosomal C* complex [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
Spliceosomal P complex [nucleoplasm] (Bos taurus)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
ALYREF [nucleoplasm] (Bos taurus)
External Reference Information
External Reference
UniProt:Q3T0I4
Gene Names
ALYREF
Reference Genes
BioGPS Gene:537706 ALYREF
ENSEMBL:ENSBTAG00000008498
KEGG:bta:537706 ALYREF
Monarch:537706 ALYREF
NCBI Gene:537706 ALYREF
UCSC:Q3T0I4 ALYREF
Reference Transcript
RefSeq:NM_001035417.2 ALYREF
Other Identifiers
537706
Bt.1768.1.A1_at
GO:0003676
GO:0003723
GO:0003729
GO:0005634
GO:0005681
GO:0005737
GO:0006397
GO:0006405
GO:0006406
GO:0006913
GO:0008380
GO:0016071
GO:0016607
GO:0043226
GO:0051028
GO:0060090
GO:0062153
Participates
as an input of
Docking of the Mature intronless derived transcript derived mRNA, TAP and Aly/Ref at the NPC (Bos taurus)
Docking of Mature Replication Dependent Histone mRNA with the NPC (Bos taurus)
Docking of Mature Histone mRNA complex:TAP at the NPC (Bos taurus)
as a component of
Nucleoplasmic mature intronless derived mRNA:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
Spliceosomal Pre-B complex [nucleoplasm] (Bos taurus)
Spliceosomal B complex [nucleoplasm] (Bos taurus)
Spliceosomal Bact complex [nucleoplasm] (Bos taurus)
Spliceosomal B* complex [nucleoplasm] (Bos taurus)
Spliceosomal C complex [nucleoplasm] (Bos taurus)
Spliceosomal C* complex [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
EJC [nucleoplasm] (Bos taurus)
Mature intronless transcript derived Histone mRNA:SLBP:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
Mature Intronless Transcript Derived Histone mRNA:TAP:Aly/Ref complex [nucleoplasm] (Bos taurus)
as a member of
ALYREF, FYTTD1, LUZP4 [nucleoplasm] (Bos taurus)
Other forms of this molecule
ALYREF [cytosol]
Inferred From
ALYREF [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001030494.1
ENSEMBL
ENSBTAT00000011202
,
ENSBTAP00000011202
,
ENSBTAG00000008498
VGNC
25855
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