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itx-1 [Golgi lumen]
Stable Identifier
R-CEL-2076606
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
Golgi lumen
Synonyms
HS(5)-AGRN, O45000
Locations in the PathwayBrowser
Expand all
Metabolism (Caenorhabditis elegans)
Metabolism of carbohydrates (Caenorhabditis elegans)
Glycosaminoglycan metabolism (Caenorhabditis elegans)
Heparan sulfate/heparin (HS-GAG) metabolism (Caenorhabditis elegans)
HS-GAG biosynthesis (Caenorhabditis elegans)
HS6STs sulfate GlcN at C6 in heparan sulfate/heparin (Caenorhabditis elegans)
HS(5)-PGs [Golgi lumen] (Caenorhabditis elegans)
Homologues of HS(5)-AGRN [Golgi lumen] (Caenorhabditis elegans)
itx-1 [Golgi lumen] (Caenorhabditis elegans)
Some HSPGs are secreted to the plasma membrane (Caenorhabditis elegans)
HSPGs [Golgi lumen] (Caenorhabditis elegans)
HS(5)-PGs [Golgi lumen] (Caenorhabditis elegans)
Homologues of HS(5)-AGRN [Golgi lumen] (Caenorhabditis elegans)
itx-1 [Golgi lumen] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:O45000
Gene Names
itx-1
Reference Genes
BioGPS Gene:171846 itx-1
CTD Gene:171846 itx-1
ENSEMBL:WBGene00002174
Monarch:171846 itx-1
NCBI Gene:171846 itx-1
UCSC:O45000 itx-1
Wormbase:WBGene00002174
Reference Transcript
RefSeq:NM_001262315.2 itx-1
Other Identifiers
171846
18460419
188000_at
A_12_P111752
CE32737
CE_WBGene00002174_A
CE_WBGene00002174_B
CGZ0038132
W03D8.6
W03D8.6_2812-2871_0.803_83_A
W03D8.6_2869-2928_0.798_95_B
W03D8.6_4333-4392_0.901_23_C
W03D8_6P03883
W03D8_6P04480
W03D8_6P04766
WBGene00002174
cea2.p.18903
Participates
as a member of
Homologues of HS(5)-AGRN [Golgi lumen] (Caenorhabditis elegans)
Other forms of this molecule
itx-1 [lysosomal lumen]
itx-1 [lysosomal lumen]
itx-1 [Golgi lumen]
itx-1 [plasma membrane]
itx-1 [plasma membrane]
itx-1 [plasma membrane]
itx-1 [plasma membrane]
itx-1 [plasma membrane]
itx-1 [plasma membrane]
itx-1 [extracellular region]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
itx-1 [Golgi lumen]
Inferred From
HS(5)-AGRN [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001249244.2
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