Reactome | ubc-9 [nucleoplasm]

ubc-9 [nucleoplasm]

Stable Identifier

R-CEL-3730617

Type

Protein [EntityWithAccessionedSequence]

Species

Caenorhabditis elegans

Compartment

nucleoplasm

Synonyms

SUMO1-C93-UBE2I, Q95017

Locations in the PathwayBrowser

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DNA Repair (Caenorhabditis elegans)

- Nucleotide Excision Repair (Caenorhabditis elegans)
  - Global Genome Nucleotide Excision Repair (GG-NER) (Caenorhabditis elegans)
    - Formation of Incision Complex in GG-NER (Caenorhabditis elegans)
      - SUMOylation of XPC (Caenorhabditis elegans)
        
        SUMO1,2,3:UBE2I [nucleoplasm] (Caenorhabditis elegans)
        
        SUMO1:C93-UBE2I [nucleoplasm] (Caenorhabditis elegans)
        
        ubc-9 [nucleoplasm] (Caenorhabditis elegans)

Gene expression (Transcription) (Caenorhabditis elegans)

- RNA Polymerase II Transcription (Caenorhabditis elegans)
  - Generic Transcription Pathway (Caenorhabditis elegans)
    - Transcriptional regulation by the AP-2 (TFAP2) family of transcription factors (Caenorhabditis elegans)
      - Negative regulation of activity of TFAP2 (AP-2) family transcription factors (Caenorhabditis elegans)
        
        SUMOylation of TFAP2C with SUMO1 (Caenorhabditis elegans)
        
        SUMO1:C93-UBE2I [nucleoplasm] (Caenorhabditis elegans)
        
        ubc-9 [nucleoplasm] (Caenorhabditis elegans)

External Reference Information

External Reference

UniProt:Q95017

Gene Names

ubc-9

Reference Genes

BioGPS Gene:3565767 ubc-9

ENSEMBL:WBGene00006706

KEGG Gene (Caenorhabditis elegans):CELE_F29B9.6 ubc-9

Monarch:3565767 ubc-9

NCBI Gene:3565767 ubc-9

UCSC:Q95017 ubc-9

Wormbase:WBGene00006706

Reference Transcript

RefSeq:NM_001027987.3 ubc-9

Other Identifiers

175843_s_at

18537384

18537391

191888_at

191889_s_at

3565767

A_12_P106480

A_12_P143320

A_12_P143321

CE09784

CE_WBGene00006706_A

CE_WBGene00006706_B

CE_WBGene00006706_C

CE_WBGene00017921_A

CGZ0018850

F29B9.5

F29B9.5_267-326_0.924_3_A

F29B9.5_387-446_0.886_15_B

F29B9.6

F29B9.6_280-339_0.938_2_C

F29B9.6_368-427_0.964_1_A

F29B9.6_452-511_0.936_4_B

F29B9_6P00039

F29B9_6P00242

F29B9_6P00384

WBGene00006706

WBGene00017921

cea2.c.27963

Participates

as a component of

SUMO1:C93-UBE2I [nucleoplasm] (Caenorhabditis elegans)

Other forms of this molecule

ubc-9 [nucleoplasm]

ubc-9 [cytosol]

ubc-9 [nucleoplasm]

Inferred From

SUMO1-C93-UBE2I [nucleoplasm] (Homo sapiens)

Modified Residues

Name

Inter-chain Crosslink via S-(glycyl)-L-cysteine (Cys-Gly) at 93 and 97 (in Homo sapiens)

Coordinate

PsiMod Name

S-(glycyl)-L-cysteine (Cys-Gly)

PsiMod Definition

A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue by a thioester bond to form S-glycyl-L-cysteine.

Cross References

RefSeq

NP_001023158.1

PRO

Q95017

Interactors (8)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:P55853	5	smo-1 [cytosol] (R-CEL-4656941) smo-1 [nucleoplasm] (R-CEL-3730622) smo-1 [nucleoplasm] (R-CEL-3730616) smo-1 [nucleoplasm] (R-CEL-877304) smo-1 [nucleoplasm] (R-CEL-2990831)	0.712	5
UniProt:Q95Q25	2	rad-51 [nucleoplasm] (R-CEL-62637) phospho-rad-51 [nucleoplasm] (R-CEL-5685231)	0.668	4
UniProt:Q95017	6	ubc-9 [nucleoplasm] (R-CEL-4085358) ubc-9 [cytosol] (R-CEL-4656944) ubc-9 [cytosol] (R-CEL-4655342) ubc-9 [cytosol] (R-CEL-4656909) ubc-9 [nucleoplasm] (R-CEL-3730617) ubc-9 [nucleoplasm] (R-CEL-912481)	0.553	2
UniProt:Q21209 BARD1			0.508	4
UniProt:G5EF84 GIP2			0.488	2
UniProt:Q21747 Q21747			0.488	2
UniProt:Q9NA84 Q9NA84			0.488	2
UniProt:Q94361	5	monoSUMO1-K35-PIAS4 [nucleoplasm] (R-CEL-3968415) PIAS2-1 [nucleoplasm] (R-CEL-2993785) PIAS3 [nucleoplasm] (R-CEL-2993764) PIAS1 [nucleoplasm] (R-CEL-877307) PIAS4 [nucleoplasm] (R-CEL-2993789)	0.488	2