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TCEA1 [nucleoplasm]
Stable Identifier
R-CEL-65748
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
nucleoplasm
Synonyms
P52652
Locations in the PathwayBrowser
Expand all
DNA Repair (Caenorhabditis elegans)
Nucleotide Excision Repair (Caenorhabditis elegans)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Caenorhabditis elegans)
Dual incision in TC-NER (Caenorhabditis elegans)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Caenorhabditis elegans)
TC-NER incision complex [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Caenorhabditis elegans)
TC-NER incision complex [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Caenorhabditis elegans)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Caenorhabditis elegans)
TC-NER pre-incision complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Formation of TC-NER Pre-Incision Complex (Caenorhabditis elegans)
Assembly of the pre-incision complex in TC-NER (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
UVSSA:USP7 deubiquitinates ERCC6 (Caenorhabditis elegans)
TC-NER pre-incision complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Gap-filling DNA repair synthesis and ligation in TC-NER (Caenorhabditis elegans)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Caenorhabditis elegans)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Caenorhabditis elegans)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Gene expression (Transcription) (Caenorhabditis elegans)
RNA Polymerase II Transcription (Caenorhabditis elegans)
Generic Transcription Pathway (Caenorhabditis elegans)
Transcriptional Regulation by TP53 (Caenorhabditis elegans)
TP53 Regulates Transcription of DNA Repair Genes (Caenorhabditis elegans)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Caenorhabditis elegans)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Caenorhabditis elegans)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Caenorhabditis elegans)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Caenorhabditis elegans)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Caenorhabditis elegans)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
RNA Polymerase II Pre-transcription Events (Caenorhabditis elegans)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Caenorhabditis elegans)
Paused processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Abortive termination of elongation after arrest (Caenorhabditis elegans)
Aborted elongation complex after arrest [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Resumption of elongation after recovery from pausing (Caenorhabditis elegans)
Paused processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TFIIS-mediated recovery of elongation from arrest (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
RNA Polymerase II Transcription Elongation (Caenorhabditis elegans)
Addition of nucleotides leads to transcript elongation (Caenorhabditis elegans)
Elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Formation of RNA Pol II elongation complex (Caenorhabditis elegans)
Recruitment of elongation factors to form elongation complex (Caenorhabditis elegans)
Elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Pol II elongation complex moves on the template as transcript elongates (Caenorhabditis elegans)
Elongation complex prior to separation [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Separation of elongating transcript from template (Caenorhabditis elegans)
Elongation complex prior to separation [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Caenorhabditis elegans)
TCEA1 [nucleoplasm] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:P52652
Reference Genes
BioGPS Gene:174450
ENSEMBL:WBGene00012000
Monarch:174450
NCBI Gene:174450
UCSC:P52652
Wormbase:WBGene00012000
Reference Transcript
RefSeq:NM_063540.1
Other Identifiers
174450
18489051
191738_at
A_12_P100042
CE03726
CE_WBGene00012000_A
CE_WBGene00012000_B
CGZ0036700
GO:0003676
GO:0003677
GO:0005634
GO:0006351
GO:0006368
GO:0008270
GO:0043226
GO:0046872
T24H10.1
T24H10.1_692-751_0.951_3_C
T24H10.1_728-787_0.957_1_A
T24H10.1_832-891_0.949_4_B
T24H10_1P00335
T24H10_1P00536
T24H10_1P00735
WBGene00012000
cea2.p.47967
Participates
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Caenorhabditis elegans)
Paused processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Caenorhabditis elegans)
Elongation complex prior to separation [nucleoplasm] (Caenorhabditis elegans)
Processive elongation complex [nucleoplasm] (Caenorhabditis elegans)
Elongation complex [nucleoplasm] (Caenorhabditis elegans)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Caenorhabditis elegans)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Caenorhabditis elegans)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Caenorhabditis elegans)
TC-NER pre-incision complex [nucleoplasm] (Caenorhabditis elegans)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Caenorhabditis elegans)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Caenorhabditis elegans)
as an input of
Recruitment of elongation factors to form elongation complex (Caenorhabditis elegans)
Assembly of the pre-incision complex in TC-NER (Caenorhabditis elegans)
Inferred From
TCEA1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_495941.1
PRO
P52652
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