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phf-5 [nucleoplasm]
Stable Identifier
R-CEL-66652
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
nucleoplasm
Synonyms
PHF5A, G5EBY6
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Caenorhabditis elegans)
Processing of Capped Intron-Containing Pre-mRNA (Caenorhabditis elegans)
mRNA 3'-end processing (Caenorhabditis elegans)
mRNA Polyadenylation (Caenorhabditis elegans)
Core CPA complex binds capped pre-mRNA (Caenorhabditis elegans)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Caenorhabditis elegans)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Caenorhabditis elegans)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Caenorhabditis elegans)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
PP1 dephosphorylates RNA Pol II (Caenorhabditis elegans)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
RBBP6 activates CPSF complex (Caenorhabditis elegans)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
mRNA Splicing (Caenorhabditis elegans)
mRNA Splicing - Major Pathway (Caenorhabditis elegans)
Formation of the Spliceosomal Bact complex (Caenorhabditis elegans)
Spliceosomal B complex [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal Bact complex [nucleoplasm] (Caenorhabditis elegans)
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Formation of the Spliceosomal C complex containing intron lariat (Caenorhabditis elegans)
Spliceosomal B* complex [nucleoplasm] (Caenorhabditis elegans)
U2 12S snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C complex [nucleoplasm] (Caenorhabditis elegans)
U2 12S snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Formation of the Spliceosomal C* complex (Caenorhabditis elegans)
Spliceosomal C complex [nucleoplasm] (Caenorhabditis elegans)
U2 12S snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
U2 12S snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Formation of the Spliceosomal P complex and exon ligation (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
U2 12S snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal P complex [nucleoplasm] (Caenorhabditis elegans)
U2 12S snRNP [nucleoplasm] (Caenorhabditis elegans)
phf-5 [nucleoplasm] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:G5EBY6
Gene Names
phf-5
Reference Genes
BioGPS Gene:3564851 phf-5
ENSEMBL:WBGene00004016
KEGG:cel:CELE_Y54F10BM.14 phf-5
Monarch:3564851 phf-5
NCBI Gene:3564851 phf-5
UCSC:G5EBY6 phf-5
Wormbase:WBGene00004016
Wormbase:WBGene00004016 phf-5
Reference Transcript
RefSeq:NM_001027738.2 phf-5
Other Identifiers
3564851
GO:0000398
GO:0005634
GO:0005686
GO:0005737
GO:0016071
GO:0071011
Participates
as a component of
U2 snRNP [nucleoplasm] (Caenorhabditis elegans)
U2 12S snRNP [nucleoplasm] (Caenorhabditis elegans)
Inferred From
PHF5A [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001022909.1
ENSEMBL
Y54F10BM.14.1
,
WBGene00004016
,
Y54F10BM.14.1
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