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ptb-1 [nucleoplasm]
Stable Identifier
R-CEL-71923
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
nucleoplasm
Synonyms
PTBP1, Q18999
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Caenorhabditis elegans)
Processing of Capped Intron-Containing Pre-mRNA (Caenorhabditis elegans)
Formation of pre-mRNPs (Caenorhabditis elegans)
Alternative Splicing Factors [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
capped, methylated pre-mRNP:CBC complex [nucleoplasm] (Caenorhabditis elegans)
Alternative Splicing Factors [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
mRNA Splicing (Caenorhabditis elegans)
mRNA Splicing - Major Pathway (Caenorhabditis elegans)
Formation of the Spliceosomal C* complex (Caenorhabditis elegans)
Spliceosomal C complex [nucleoplasm] (Caenorhabditis elegans)
Alternative Splicing Factors [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
Alternative Splicing Factors [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
Formation of the Spliceosomal P complex and exon ligation (Caenorhabditis elegans)
Spliceosomal C* complex [nucleoplasm] (Caenorhabditis elegans)
Alternative Splicing Factors [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
Spliceosomal P complex [nucleoplasm] (Caenorhabditis elegans)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Caenorhabditis elegans)
Alternative Splicing Factors [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
Signal Transduction (Caenorhabditis elegans)
Signaling by Receptor Tyrosine Kinases (Caenorhabditis elegans)
Signaling by FGFR (Caenorhabditis elegans)
Signaling by FGFR2 (Caenorhabditis elegans)
FGFR2 alternative splicing (Caenorhabditis elegans)
PTB and hnRNPA1 bind FGFR2 pre-mRNA to repress IIIb splicing and promote formation of FGFR2c mRNA (Caenorhabditis elegans)
FGFR2 IIIc-specific splicing complex [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
ptb-1 [nucleoplasm] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:Q18999
Gene Names
ptb-1
Reference Genes
BioGPS Gene:174647 ptb-1
ENSEMBL:WBGene00004207
Monarch:174647 ptb-1
NCBI Gene:174647 ptb-1
UCSC:Q18999 ptb-1
Wormbase:WBGene00004207
Reference Transcript
RefSeq:NM_171035.4 ptb-1
Other Identifiers
174647
18481277
193569_at
A_12_P104982
A_12_P161198
A_12_P161199
CE30509
CE_WBGene00004207_A
CE_WBGene00004207_B
CGZ0013887
D2089.4
D2089.4a
D2089.4a_1624-1683_0.937_6_C
D2089.4a_1665-1724_0.953_1_A
D2089.4a_1777-1836_0.940_2_B
D2089_4aP00356
D2089_4aP00485
D2089_4aP00534
GO:0003676
GO:0003723
GO:0005634
GO:0006397
GO:0016071
GO:0043226
WBGene00004207
cea2.d.01891
Participates
as a component of
FGFR2 IIIc-specific splicing complex [nucleoplasm] (Caenorhabditis elegans)
as an input of
PTB and hnRNPA1 bind FGFR2 pre-mRNA to repress IIIb splicing and promote formation of FGFR2c mRNA (Caenorhabditis elegans)
as a member of
Alternative Splicing Factors [nucleoplasm] (Caenorhabditis elegans)
Inferred From
PTBP1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_741041.1
Interactors (3)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:G5EFF1 ASD2
0.488
2
UniProt:Q18999
1
ptb-1 [nucleoplasm]
(R-CEL-71923)
0.488
2
UniProt:Q9N394 Q9N394
0.488
2
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