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GPC6 [plasma membrane]
Stable Identifier
R-CFA-2076682
Type
Protein [EntityWithAccessionedSequence]
Species
Canis familiaris
Compartment
plasma membrane
Synonyms
HS(6)-GPC6, A0A8I3N3M6
Locations in the PathwayBrowser
Expand all
Metabolism (Canis familiaris)
Metabolism of carbohydrates and carbohydrate derivatives (Canis familiaris)
Glycosaminoglycan metabolism (Canis familiaris)
Heparan sulfate/heparin (HS-GAG) metabolism (Canis familiaris)
HS-GAG biosynthesis (Canis familiaris)
Some HSPGs are secreted to the plasma membrane (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
HS-GAG degradation (Canis familiaris)
HS-GAGs translocate to the lysosome for degradation (Canis familiaris)
HPSE2:HS/HPIN-PGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
Heparanase 2 (HPSE2) binds heparan sulfate proteoglycans (Canis familiaris)
HPSE2:HS/HPIN-PGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
Metabolism of vitamins and cofactors (Canis familiaris)
Metabolism of fat-soluble vitamins (Canis familiaris)
Retinoid metabolism and transport (Canis familiaris)
CR:atREs binds apoE and HSPG (Canis familiaris)
CR:atREs:HSPG:apoE [plasma membrane] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Canis familiaris)
CR:atREs:HSPG:apoE [early endosome] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
CR:atREs:HSPG:apoE [plasma membrane] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
Sensory Perception (Canis familiaris)
Visual phototransduction (Canis familiaris)
Retinoid metabolism and transport (Canis familiaris)
CR:atREs binds apoE and HSPG (Canis familiaris)
CR:atREs:HSPG:apoE [plasma membrane] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
LRPs transport extracellular CR:atREs:HSPG:apoE to cytosol (Canis familiaris)
CR:atREs:HSPG:apoE [early endosome] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
CR:atREs:HSPG:apoE [plasma membrane] (Canis familiaris)
HSPGs [plasma membrane] (Canis familiaris)
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
GPC6 [plasma membrane] (Canis familiaris)
External Reference Information
External Reference
UniProt:A0A8I3N3M6
Gene Names
GPC6
Reference Genes
BioGPS Gene:476962 GPC6
ENSEMBL:ENSCAFG00845007327.1
Monarch:476962 GPC6
NCBI Gene:476962 GPC6
UCSC:A0A8I3N3M6 GPC6
Reference Transcript
RefSeq:XM_038569872.1 GPC6
RefSeq:XM_534162.6 GPC6
RefSeq:XM_038431287.1 GPC6
Other Identifiers
476962
Cfa.15217.1.S1_at
Cfa.15217.2.A1_at
Cfa.7335.1.A1_at
CfaAffx.8913.1.S1_at
CfaAffx.8915.1.S1_at
CfaAffx.8917.1.S1_at
GO:0005886
GO:0009966
GO:0016477
GO:0030312
GO:0031012
GO:0048870
GO:0062023
GO:0098552
Participates
as a member of
HS/HPIN-PGs [plasma membrane] (Canis familiaris)
Other forms of this molecule
GPC6 [plasma membrane]
GPC6 [plasma membrane]
GPC6 [plasma membrane]
GPC6 [plasma membrane]
GPC6 [plasma membrane]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [Golgi lumen]
GPC6 [lysosomal lumen]
GPC6 [Golgi lumen]
Inferred From
HS(6)-GPC6 [plasma membrane]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63666) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS6S-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_038287215.1
,
XP_038425800.1
,
XP_534162.3
ENSEMBL
ENSCAFP00845010107
,
ENSCAFG00845007327
,
ENSCAFT00845012966
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