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PNKP [nucleoplasm]
Stable Identifier
R-DDI-5649651
Type
Protein [EntityWithAccessionedSequence]
Species
Dictyostelium discoideum
Compartment
nucleoplasm
Synonyms
PNKP, Q54U78
Locations in the PathwayBrowser
Expand all
DNA Repair (Dictyostelium discoideum)
Base Excision Repair (Dictyostelium discoideum)
Resolution of Abasic Sites (AP sites) (Dictyostelium discoideum)
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway (Dictyostelium discoideum)
LIG3 ligates NEIL1,NEIL2-generated single strand break (Dictyostelium discoideum)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Dictyostelium discoideum)
PNKP [nucleoplasm] (Dictyostelium discoideum)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Dictyostelium discoideum)
PNKP [nucleoplasm] (Dictyostelium discoideum)
PNKP hydrolyzes the terminal 3'Pi at the NEIL1,NEIL2-generated single strand break (SSB) (Dictyostelium discoideum)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Dictyostelium discoideum)
PNKP [nucleoplasm] (Dictyostelium discoideum)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Dictyostelium discoideum)
PNKP [nucleoplasm] (Dictyostelium discoideum)
PNKP [nucleoplasm] (Dictyostelium discoideum)
POLB incorporates a single nucleotide in place of excised AP residue in NEIL1,NEIL2-mediated AP site resolution (Dictyostelium discoideum)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Dictyostelium discoideum)
PNKP [nucleoplasm] (Dictyostelium discoideum)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Dictyostelium discoideum)
PNKP [nucleoplasm] (Dictyostelium discoideum)
External Reference Information
External Reference
UniProt:Q54U78
Gene Names
PNKP
Reference Genes
BioGPS Gene:8622956 PNKP
dictyBase:DDB_G0281229
ENSEMBL:DDB_G0281229
KEGG Gene (Dictyostelium discoideum):DDB_G0281229 PNKP
Monarch:8622956 PNKP
NCBI Gene:8622956 PNKP
Reference Transcript
RefSeq:XM_635806.1 PNKP
Participates
as a component of
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Dictyostelium discoideum)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Dictyostelium discoideum)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Dictyostelium discoideum)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Dictyostelium discoideum)
Inferred From
PNKP [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_640898.1
OpenTargets
ENSG00000039650
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