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AQR [nucleoplasm]
Stable Identifier
R-DDI-6781960
Type
Protein [EntityWithAccessionedSequence]
Species
Dictyostelium discoideum
Compartment
nucleoplasm
Synonyms
Q555Z2
Locations in the PathwayBrowser
Expand all
DNA Repair (Dictyostelium discoideum)
Nucleotide Excision Repair (Dictyostelium discoideum)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Dictyostelium discoideum)
Dual incision in TC-NER (Dictyostelium discoideum)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Dictyostelium discoideum)
TC-NER incision complex [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Dictyostelium discoideum)
TC-NER incision complex [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Dictyostelium discoideum)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Dictyostelium discoideum)
TC-NER pre-incision complex [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Dictyostelium discoideum)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Formation of TC-NER Pre-Incision Complex (Dictyostelium discoideum)
UVSSA:USP7 deubiquitinates ERCC6 (Dictyostelium discoideum)
TC-NER pre-incision complex [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Gap-filling DNA repair synthesis and ligation in TC-NER (Dictyostelium discoideum)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Dictyostelium discoideum)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Metabolism of RNA (Dictyostelium discoideum)
Processing of Capped Intron-Containing Pre-mRNA (Dictyostelium discoideum)
mRNA Splicing (Dictyostelium discoideum)
mRNA Splicing - Major Pathway (Dictyostelium discoideum)
Formation of Exon Junction Complex (Dictyostelium discoideum)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Formation of an intermediate Spliceosomal C (Bact) complex (Dictyostelium discoideum)
Spliceosomal B Complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Formation of the active Spliceosomal C (B*) complex (Dictyostelium discoideum)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Dictyostelium discoideum)
AQR [nucleoplasm] (Dictyostelium discoideum)
External Reference Information
External Reference
UniProt:Q555Z2
Reference Genes
BioGPS Gene:8619345
dictyBase:DDB_G0274797
ENSEMBL:DDB_G0274797
KEGG Gene (Dictyostelium discoideum):DDB_G0274797
Monarch:8619345
NCBI Gene:8619345
Reference Transcript
RefSeq:XM_638826.1
Participates
as a component of
pre-EJC:Spliceosomal C:pre-mRNP:CBC [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal Active C (B*) Complex [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal active C complex with lariat containing, 5'-end cleaved pre-mRNP:CBC complex [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal B Complex [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal Intermediate C (Bact) Complex [nucleoplasm] (Dictyostelium discoideum)
XAB2 complex [nucleoplasm] (Dictyostelium discoideum)
Inferred From
AQR [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_643918.1
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