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Upf3 [nucleoplasm]
Stable Identifier
R-DME-156776
Type
Protein [EntityWithAccessionedSequence]
Species
Drosophila melanogaster
Compartment
nucleoplasm
Synonyms
UPF3B, Q9W1H3
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Drosophila melanogaster)
RNA Polymerase II Transcription (Drosophila melanogaster)
RNA Polymerase II Transcription Termination (Drosophila melanogaster)
Cleavage of mRNA at the 3'-end (Drosophila melanogaster)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
Metabolism of RNA (Drosophila melanogaster)
Processing of Capped Intron-Containing Pre-mRNA (Drosophila melanogaster)
Transport of Mature Transcript to Cytoplasm (Drosophila melanogaster)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Drosophila melanogaster)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Drosophila melanogaster)
NXF1,2:NXT1::polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Drosophila melanogaster)
capped mRNA:CBC:EJC:TREX (minus DDX39B) [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
Transport of the export-competent mRNP complex through the NPC (Drosophila melanogaster)
NPC:NXF1,2:NXT1:EJC:CBC:mRNA [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
mRNA 3'-end processing (Drosophila melanogaster)
Cleavage of mRNA at the 3'-end (Drosophila melanogaster)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
mRNA polyadenylation (Drosophila melanogaster)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
mRNA Splicing (Drosophila melanogaster)
mRNA Splicing - Major Pathway (Drosophila melanogaster)
Formation of the Spliceosomal C* complex (Drosophila melanogaster)
Spliceosomal C complex [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
Spliceosomal C* complex [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
Formation of the Spliceosomal P complex and exon ligation (Drosophila melanogaster)
Spliceosomal C* complex [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
Spliceosomal P complex [nucleoplasm] (Drosophila melanogaster)
spliced mRNA:EJC:CBC complex:Alternative splicing factor [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Upf3 [nucleoplasm] (Drosophila melanogaster)
External Reference Information
External Reference
UniProt:Q9W1H3
Gene Names
Upf3
Reference Genes
BioGPS Gene:37792 Upf3
ENSEMBL:FBgn0034923
FlyBase:FBgn0034923
KEGG Gene (Drosophila melanogaster):Dmel_CG11184 Upf3
Monarch:37792 Upf3
NCBI Gene:37792 Upf3
UCSC:Q9W1H3 Upf3
Reference Transcript
RefSeq:NM_138000.3 Upf3
RefSeq:NM_166629.2 Upf3
Other Identifiers
141813_at
1637092_a_at
37792
GO:0000184
GO:0003676
GO:0003723
GO:0003729
GO:0005634
GO:0005730
GO:0005737
GO:0016071
GO:0043226
GO:0045727
Participates
as a component of
Spliceosomal C complex [nucleoplasm] (Drosophila melanogaster)
Spliceosomal C* complex [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
EJC [nucleoplasm] (Drosophila melanogaster)
Other forms of this molecule
Upf3 [cytosol]
Upf3 [cytosol]
Inferred From
UPF3B [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_726375.1
,
NP_611844.3
Flybase
FBgn0034923
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