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ctdp1 [nucleoplasm]
Stable Identifier
R-DRE-113416
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
CTDP1, E7FFL3
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
Generic Transcription Pathway (Danio rerio)
Transcriptional Regulation by TP53 (Danio rerio)
TP53 Regulates Transcription of DNA Repair Genes (Danio rerio)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Danio rerio)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Danio rerio)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Danio rerio)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Danio rerio)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
RNA Polymerase II Pre-transcription Events (Danio rerio)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Abortive termination of early transcription elongation by DSIF:NELF (Danio rerio)
DSIF:NELF:early elongation complex [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Abortive termination of elongation after arrest (Danio rerio)
Aborted elongation complex after arrest [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Resumption of elongation after recovery from pausing (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
TFIIS-mediated recovery of elongation from arrest (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Elongation (Danio rerio)
Addition of nucleotides leads to transcript elongation (Danio rerio)
Elongation complex [nucleoplasm] (Danio rerio)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Formation of the Early Elongation Complex (Danio rerio)
DSIF complex binds to RNA Pol II (hypophosphorylated) (Danio rerio)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Formation of DSIF:NELF:early elongation complex (Danio rerio)
DSIF:NELF:early elongation complex [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Hypophosphorylation of RNA Pol II CTD by FCP1P protein (Danio rerio)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Pol II elongation complex moves on the template as transcript elongates (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Separation of elongating transcript from template (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Danio rerio)
ctdp1 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:E7FFL3
Gene Names
ctdp1
Reference Genes
ENSEMBL:ENSDARG00000017522
Other Identifiers
13073647
442930
A_15_P101571
A_15_P182526
A_15_P642731
CUST_15577_PI428451953
DRER46637
ENSDART00000021519
ENSDART00000021519_1
ENSDART00000021519_2
GO:0003674
GO:0004721
GO:0004722
GO:0005575
GO:0005622
GO:0005634
GO:0006464
GO:0008150
GO:0008420
GO:0009058
GO:0016787
GO:0016791
GO:0034641
GO:0043226
GO:0070940
GO:0106306
GO:0106307
MADDr01009564
NM_001002873
OTTDART00000019160
Participates
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Danio rerio)
Paused processive elongation complex [nucleoplasm] (Danio rerio)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Danio rerio)
Elongation complex prior to separation [nucleoplasm] (Danio rerio)
Processive elongation complex [nucleoplasm] (Danio rerio)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Danio rerio)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Danio rerio)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
as an input of
Hypophosphorylation of RNA Pol II CTD by FCP1P protein (Danio rerio)
Inferred From
CTDP1 [nucleoplasm]
(Homo sapiens)
Cross References
ZFIN
ZDB-GENE-040720-1
Ensembl
ENSDARG00000017522
,
ENSDART00000148516
,
ENSDARP00000123927
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