Reactome | col2a1a [endoplasmic reticulum lumen]

col2a1a [endoplasmic reticulum lumen]

Stable Identifier

R-DRE-2023572

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-3Hyp-GalHyl-COL2A1(26-1487), Q2LDA1

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q2LDA1

Gene Names

col2a1a

Reference Genes

BioGPS Gene:562496 col2a1a

CTD Gene:562496 col2a1a

ENSEMBL:ENSDARG00000069093

ENSEMBL:ENSDARG00000069093.6 col2a1a

KEGG Gene (Danio rerio):562496 col2a1a

Monarch:562496 col2a1a

NCBI Gene:562496 col2a1a

Reference Transcript

RefSeq:NM_131292.1 col2a1a

Other Identifiers

13244992

562496

A_15_P189276

A_15_P474985

A_15_P658791

CUST_3591_PI428451958

DRER13915

DRER15313

DRER58806

Dr.3761.1.S1_at

ENSDART00000074375

ENSDART00000074375_1

ENSDART00000074375_2

ENSDART00000091307

GT_Xhyb_XM_005166861.1_63871

GT_Xhyb_XM_005166862.1_63861

GT_Xhyb_XM_005166863.1_63881

GT_Xhyb_XM_005166864.1_63891

LOLS01022

LOLS03965

LOLT00967

MADDr01014122

NM_131292

OTTDART00000025812

XM_682285

XM_687777

XM_691272

XM_703659

Participates

as an input of

Association of procollagen type II (Danio rerio)

as a candidate of

3,4-Hyp 5-Gal-Hyl collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)

as a component of

C-linked procollagen type II trimer [endoplasmic reticulum lumen] (Danio rerio)

Other forms of this molecule

col2a1a [endoplasmic reticulum lumen]

col2a1a [extracellular region]

Inferred From

Alpha-1(II) propeptides [endoplasmic reticulum lumen] (Homo sapiens)

3x4Hyp-3Hyp-GalHyl-COL2A1(26-1487) [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_571367.1

ZFIN

ZDB-GENE-980526-192

Ensembl

ENSDART00000100234, ENSDARP00000091007, ENSDARG00000069093