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Gal-Gal-Xyl-HSPG2 [Golgi lumen]
Stable Identifier
R-DRE-2063971
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
A0A0R4IZA6
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Chondroitin sulfate/dermatan sulfate metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GALT6 transfers Gal to the tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Gal-Xyl-HSPG2 [Golgi lumen] (Danio rerio)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Gal-Xyl-HSPG2 [Golgi lumen] (Danio rerio)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Gal-Xyl-HSPG2 [Golgi lumen] (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GALT6 transfers Gal to the tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Gal-Xyl-HSPG2 [Golgi lumen] (Danio rerio)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Gal-Xyl-HSPG2 [Golgi lumen] (Danio rerio)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Gal-Xyl-HSPG2 [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:A0A0R4IZA6
Reference Genes
ENSEMBL:ENSDARG00000076564
ENSEMBL:ENSDARG00000076564.5
Other Identifiers
13140536
13140605
565429
A_15_P517062
A_15_P704491
CUST_12535_PI428451958
CUST_17135_PI428451953
CUST_17136_PI428451953
DRER18873
DRER19495
DRER46349
ENSDART00000111029
GO:0005509
GO:0005515
XM_684413
XM_686803
XM_688568
XM_688627
XM_688712
Participates
as a member of
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Other forms of this molecule
HSPG2(22-4196) [extracellular region]
HSPG2(4197-4391) [extracellular region]
HSPG2(22-?) [extracellular region]
HSPG2(?-4391) [extracellular region]
HSPG2(22-4391) [extracellular region]
HS(4)-HSPG2 [plasma membrane]
HS(6)-HSPG2 [plasma membrane]
HS(2)-HSPG2 [plasma membrane]
HS(1)-HSPG2 [plasma membrane]
HS(3)-HSPG2 [plasma membrane]
HS(5)-HSPG2 [plasma membrane]
HSPG2(3687-4391) [extracellular region]
XylS-HSPG2(22-4391) [Golgi lumen]
Gal-Xyl-HSPG2 [Golgi lumen]
HSPG2(22-4391) [Golgi lumen]
GlcA-Gal-Gal-Xyl-HSPG2 [Golgi lumen]
HS(3)-HSPG2 [Golgi lumen]
HS(4)-HSPG2 [Golgi lumen]
HS(2)-HSPG2 [Golgi lumen]
HS(1)-HSPG2 [Golgi lumen]
Heparan(4)-HSPG2 [Golgi lumen]
Heparan(3)-HSPG2 [Golgi lumen]
Heparan(2)-HSPG2 [Golgi lumen]
Heparan(1)-HSPG2 [Golgi lumen]
Heparan-HSPG2 [Golgi lumen]
HS(5)-HSPG2 [Golgi lumen]
HS(6)-HSPG2 [Golgi lumen]
HS(6)-HSPG2 [lysosomal lumen]
HSPG2(22-4391) [lysosomal lumen]
Inferred From
Gal-Gal-Xyl-HSPG2 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63503) at unknown position
Modification
beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
ZFIN
ZDB-GENE-080807-4
Ensembl
ENSDART00000157844
,
ENSDARP00000141317
,
ENSDARG00000076564
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