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Gal-Xyl-DCN [Golgi lumen]
Stable Identifier
R-DRE-2064080
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
Q5RI45
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Chondroitin sulfate/dermatan sulfate metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GALT6 transfers Gal to the tetrasaccharide linker (Danio rerio)
Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Xyl-DCN [Golgi lumen] (Danio rerio)
B4GALT7 transfers Gal group to xylosyl-unit of the tetrasaccharide linker (Danio rerio)
Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Xyl-DCN [Golgi lumen] (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GALT6 transfers Gal to the tetrasaccharide linker (Danio rerio)
Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Xyl-DCN [Golgi lumen] (Danio rerio)
B4GALT7 transfers Gal group to xylosyl-unit of the tetrasaccharide linker (Danio rerio)
Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Gal-Xyl-DCN [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:Q5RI45
Reference Genes
ENSEMBL:ENSDARG00000012066
Other Identifiers
13188035
64698
A_15_P113905
CJ010766
CJ010768
CJ010769
CUST_17774_PI428451953
DRER01573
DRER25272
Dr.16078.1.S1_at
ENSDART00000013085
ENSDART00000013085_1
ENSDART00000013085_2
GO:0005198
GO:0005515
GO:0005518
GO:0005576
GO:0005615
GO:0006914
GO:0010508
GO:0030021
GO:0048856
GO:0050654
GO:0051216
GO:0060028
GO:1901135
JP011164
JP011166
JP011167
LOLS00966
LOLS08051
MADDr01006718
NM_131697
OTTDART00000009229
XM_696892
Participates
as a member of
Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Other forms of this molecule
DCN(31-?) [extracellular region]
DCN(?-359) [extracellular region]
DCN [extracellular region]
D2,4,4(S)3-DCN [lysosomal lumen]
D2,4(S)2-DCN [lysosomal lumen]
D4S-DCN [lysosomal lumen]
XylS-DCN [Golgi lumen]
DCN [Golgi lumen]
Gal-Gal-Xyl-DCN [Golgi lumen]
GlcA-Gal-Gal-Xyl-DCN [Golgi lumen]
D2,4(S)2-DCN [Golgi lumen]
dermatan-DCN [Golgi lumen]
D4S-DCN [Golgi lumen]
D2,4,4(S)3-DCN [Golgi lumen]
chondroitin(3)-DCN [Golgi lumen]
C4S-DCN [Golgi lumen]
chondroitin(2)-DCN [Golgi lumen]
chondroitin(1)-DCN [Golgi lumen]
D2,4,4(S)3-DCN [extracellular region]
D2,4(S)2-DCN [extracellular region]
D4S-DCN [extracellular region]
C6S-DCN [Golgi lumen]
CSE-DCN [Golgi lumen]
C4S-DCN [extracellular region]
C6S-DCN [extracellular region]
CSE-DCN [extracellular region]
C4S-DCN [lysosomal lumen]
C6S-DCN [lysosomal lumen]
CSE-DCN [lysosomal lumen]
DCN [lysosomal lumen]
Inferred From
Gal-Xyl-DCN [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63502) at unknown position
Modification
beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
ZFIN
ZDB-GENE-010102-1
Ensembl
ENSDARP00000025940
,
ENSDARG00000012066
,
ENSDARP00000145539
,
ENSDART00000188460
,
ENSDART00000013085
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