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bgna [Golgi lumen]
Stable Identifier
R-DRE-2064103
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
Gal-Xyl-BGN, Q6GMI5
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates and carbohydrate derivatives (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Glycosaminoglycan-protein linkage region biosynthesis (Danio rerio)
B3GALT6 transfers Gal to the tetrasaccharide linker (Danio rerio)
Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
bgna [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6GMI5
Gene Names
bgna
Reference Genes
BioGPS Gene:431774 bgna
CTD Gene:431774 bgna
ENSEMBL:ENSDARG00000017884
KEGG:dre:431774 bgna
Monarch:431774 bgna
NCBI Entrez Gene:431774 bgna
UCSC:Q6GMI5 bgna
Reference Transcript
RefSeq:NM_001002227.2 bgna
Other Identifiers
13251322
431774
A_15_P120412
A_15_P621146
CUST_1931_PI428451958
CUST_19_PI399344711
DRER03501
ENSDART00000027225
ENSDART00000027225_1
ENSDART00000027225_2
GO:0005515
GT_Spec_NM_001002227.1_268535
MADDr01009348
NM_001002227
OTTDART00000028391
Participates
as a member of
Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Other forms of this molecule
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
bgna [extracellular region]
bgna [extracellular region]
bgna [extracellular region]
bgna [extracellular region]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [extracellular region]
bgna [extracellular region]
bgna [extracellular region]
bgna [extracellular region]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [lysosomal lumen]
bgna [Golgi lumen]
bgna [Golgi lumen]
Inferred From
Gal-Xyl-BGN [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (O3-(4-β-D-galactosyl-β-D-xylosyl)-L-serine residue) at unknown position
Modification
O3-(4-β-D-galactosyl-β-D-xylosyl)-L-serine residue
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001002227.1
ENSEMBL
ENSDART00000027225
,
ENSDART00000184946
,
ENSDARP00000156458
,
ENSDARP00000017536
,
ENSDARG00000017884
ZFIN
ZDB-GENE-040704-74
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