Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
GlcA-Gal-Gal-Xyl-SDC3 [Golgi lumen]
Stable Identifier
R-DRE-2064123
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
A0A0R4IBN1
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Chondroitin sulfate/dermatan sulfate metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
GlcA-Gal-Gal-Xyl-SDC3 [Golgi lumen] (Danio rerio)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
GlcA-Gal-Gal-Xyl-SDC3 [Golgi lumen] (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
GlcA-Gal-Gal-Xyl-SDC3 [Golgi lumen] (Danio rerio)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
GlcA-Gal-Gal-Xyl-SDC3 [Golgi lumen] (Danio rerio)
HS-GAG biosynthesis (Danio rerio)
EXT1:EXT2 transfers GlcNAc to the terminal GlcA residue (Danio rerio)
GlcA-Gal-Gal-Xyl-HS proteins [Golgi lumen] (Danio rerio)
GlcA-Gal-Gal-Xyl-SDC3 [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:A0A0R4IBN1
Reference Genes
ENSEMBL:ENSDARG00000100562
ENSEMBL:ENSDARG00000100562.2
Other Identifiers
13071013
A_15_P213245
A_15_P262771
A_15_P493042
A_15_P671211
CJ009079
CUST_25622_PI428451953
DRER25031
GO:0009986
GO:0016020
GO:0016021
GO:0016477
GO:0048870
GT_Spec_XM_001919721.4_170356
JP009477
XM_695352
Participates
as a member of
GlcA-Gal-Gal-Xyl-HS proteins [Golgi lumen] (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Other forms of this molecule
SDC3 [lysosomal lumen]
HS(6)-SDC3 [lysosomal lumen]
HS(6)-SDC3 [Golgi lumen]
HS(5)-SDC3 [Golgi lumen]
Heparan-SDC3 [Golgi lumen]
Heparan(1)-SDC3 [Golgi lumen]
Heparan(2)-SDC3 [Golgi lumen]
Heparan(3)-SDC3 [Golgi lumen]
Heparan(4)-SDC3 [Golgi lumen]
HS(1)-SDC3 [Golgi lumen]
HS(2)-SDC3 [Golgi lumen]
HS(4)-SDC3 [Golgi lumen]
HS(3)-SDC3 [Golgi lumen]
Gal-Gal-Xyl-SDC3 [Golgi lumen]
SDC3 [Golgi lumen]
Gal-Xyl-SDC3 [Golgi lumen]
XylS-SDC3 [Golgi lumen]
HS(5)-SDC3 [plasma membrane]
HS(3)-SDC3 [plasma membrane]
HS(1)-SDC3 [plasma membrane]
HS(2)-SDC3 [plasma membrane]
HS(6)-SDC3 [plasma membrane]
HS(4)-SDC3 [plasma membrane]
Inferred From
GlcA-Gal-Gal-Xyl-SDC3 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63505) at unknown position
Modification
beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
Ensembl
ENSDARG00000100562
,
ENSDARP00000131513
,
ENSDART00000167903
© 2023
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text