Reactome | bgnb [Golgi lumen]

bgnb [Golgi lumen]

Stable Identifier

R-DRE-2064216

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

Golgi lumen

Synonyms

GlcA-Gal-Gal-Xyl-BGN, B7ZDB5

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:B7ZDB5

Gene Names

bgnb

Reference Genes

BioGPS Gene:792197 bgnb

CTD Gene:792197 bgnb

ENSEMBL:ENSDARG00000002945

KEGG:dre:792197 bgnb

Monarch:792197 bgnb

NCBI Gene:792197 bgnb

UCSC:B7ZDB5 bgnb

Reference Transcript

RefSeq:NM_001001825.2 bgnb

Other Identifiers

13139442

792197

A_15_P110145

A_15_P405840

A_15_P654806

BC054617.1

CUST_13595_PI428451953

CUST_13596_PI428451953

CUST_8012_PI428451958

DRER06070

DRER28940

DRER31769

DRER43866

Dr.16232.1.A1_at

ENSDART00000049836

ENSDART00000049836_1

ENSDART00000049836_2

GO:0005515

GT_Spec_NM_001001825.2_196485

LOLS12558

LOLS15666

MADDr01008781

OTTDART00000028051

Participates

as a member of

Other forms of this molecule

bgnb [Golgi lumen]

bgnb [extracellular region]

bgnb [lysosomal lumen]

bgnb [extracellular region]

bgnb [lysosomal lumen]

bgnb [Golgi lumen]

Inferred From

GlcA-Gal-Gal-Xyl-BGN [Golgi lumen] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (3-O-(β-D-glucuronosyl-(1→3)-β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine residue) at unknown position

Modification

3-O-(β-D-glucuronosyl-(1→3)-β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine residue

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_001001825.2

ENSEMBL

ENSDART00000049836, ENSDARG00000002945, ENSDARP00000049835

ZFIN

ZDB-GENE-040426-21

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