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gpc6a [Golgi lumen]
Stable Identifier
R-DRE-2064250
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
GlcA-Gal-Gal-Xyl-GPC6, F1R466
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Chondroitin sulfate/dermatan sulfate metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
gpc6a [Golgi lumen] (Danio rerio)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
gpc6a [Golgi lumen] (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
A tetrasaccharide linker sequence is required for GAG synthesis (Danio rerio)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
gpc6a [Golgi lumen] (Danio rerio)
B3GAT3 dimer transfers GlcA to tetrasaccharide linker (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
gpc6a [Golgi lumen] (Danio rerio)
HS-GAG biosynthesis (Danio rerio)
EXT1:EXT2 transfers GlcNAc to the terminal GlcA residue (Danio rerio)
GlcA-Gal-Gal-Xyl-HS proteins [Golgi lumen] (Danio rerio)
gpc6a [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:F1R466
Gene Names
gpc6a
Reference Genes
ENSEMBL:ENSDARG00000103156
Other Identifiers
12944489
12988335
571904
A_15_P179381
A_15_P450925
A_15_P548137
BC151902.1
CUST_15807_PI428451953
CUST_8690_PI428451953
DRER13744
DRER50187
DRER50312
GO:0005575
GO:0005886
GO:0007165
GO:0008150
GO:0009966
GO:0030312
GO:0031012
GO:0046658
GO:0062023
GT_Spec_NM_001109719.1_60791
XM_695545
Participates
as a member of
GlcA-Gal-Gal-Xyl-HS proteins [Golgi lumen] (Danio rerio)
GlcA-Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Other forms of this molecule
gpc6a [plasma membrane]
gpc6a [lysosomal lumen]
gpc6a [lysosomal lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
Inferred From
GlcA-Gal-Gal-Xyl-GPC6 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63505) at unknown position
Modification
beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
Ensembl
ENSDARG00000103156
,
ENSDARP00000107768
,
ENSDART00000126093
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