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gpc6a [Golgi lumen]
Stable Identifier
R-DRE-2076313
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
HS(5)-GPC6, A7MBT1
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
HS-GAG biosynthesis (Danio rerio)
HS6STs sulfate GlcN at C6 in heparan sulfate/heparin (Danio rerio)
HS(5)-PGs [Golgi lumen] (Danio rerio)
gpc6a [Golgi lumen] (Danio rerio)
Some HSPGs are secreted to the plasma membrane (Danio rerio)
HSPGs [Golgi lumen] (Danio rerio)
HS(5)-PGs [Golgi lumen] (Danio rerio)
gpc6a [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:A7MBT1
Gene Names
gpc6a
Reference Genes
BioGPS Gene:571904 gpc6a
CTD Gene:571904 gpc6a
ENSEMBL:ENSDARG00000103156
KEGG Gene (Danio rerio):571904 gpc6a
Monarch:571904 gpc6a
NCBI Gene:571904 gpc6a
Reference Transcript
RefSeq:NM_001109719.1 gpc6a
Participates
as a member of
HS(5)-PGs [Golgi lumen] (Danio rerio)
Other forms of this molecule
gpc6a [lysosomal lumen]
gpc6a [lysosomal lumen]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [plasma membrane]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
gpc6a [Golgi lumen]
Inferred From
HS(5)-GPC6 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63661) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001103189.1
ZFIN
ZDB-GENE-071004-15
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