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sdc4 [Golgi lumen]
Stable Identifier
R-DRE-2076407
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
HS(4)-SDC4, F6NMW3
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
HS-GAG biosynthesis (Danio rerio)
HS3ST1 sulfates GlcN at C3 in heparan sulfate (Danio rerio)
HS(4)-PGs [Golgi lumen] (Danio rerio)
sdc4 [Golgi lumen] (Danio rerio)
HS3STs sulfate GlcN at C3 in heparan sulfate (Danio rerio)
HS(4)-PGs [Golgi lumen] (Danio rerio)
sdc4 [Golgi lumen] (Danio rerio)
Some HSPGs are secreted to the plasma membrane (Danio rerio)
HSPGs [Golgi lumen] (Danio rerio)
HS(4)-PGs [Golgi lumen] (Danio rerio)
sdc4 [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:F6NMW3
Gene Names
sdc4
Reference Genes
ENSEMBL:ENSDARG00000059906
Other Identifiers
13223954
568593
A_15_P162711
A_15_P180011
CUST_26045_PI428451953
DRER12590
Dr.26392.1.A1_at
Dr.26405.1.S1_at
ENSDART00000083830
ENSDART00000083830_1
ENSDART00000083830_2
GO:0005575
GO:0016020
GT_Spec_NM_001048149.1_419775
LOLS11517
MADDr01003874
NM_001048149
Participates
as a member of
HS(4)-PGs [Golgi lumen] (Danio rerio)
Other forms of this molecule
sdc4 [plasma membrane]
sdc4 [lysosomal lumen]
sdc4 [lysosomal lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [Golgi lumen]
sdc4 [plasma membrane]
sdc4 [plasma membrane]
sdc4 [plasma membrane]
sdc4 [plasma membrane]
sdc4 [plasma membrane]
sdc4 [plasma membrane]
Inferred From
HS(4)-SDC4 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63657) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
Ensembl
ENSDART00000083830
,
ENSDARG00000059906
,
ENSDARP00000078265
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