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gpc1 [Golgi lumen]
Stable Identifier
R-DRE-2076605
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
Heparan(4)-GPC1, F1QCC6
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
HS-GAG biosynthesis (Danio rerio)
NDST1-4 N-deacetylates GlcNAc residues in heparan (Danio rerio)
Heparan(4)-PGs [Golgi lumen] (Danio rerio)
gpc1 [Golgi lumen] (Danio rerio)
NDST1-4 can sulfate a glucosamine residue in heparan to form heparan sulfate (HS) (Danio rerio)
Heparan(4)-PGs [Golgi lumen] (Danio rerio)
gpc1 [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:F1QCC6
Gene Names
gpc1
Reference Genes
BioGPS Gene:553367 gpc1
CTD Gene:553367 gpc1
ENSEMBL:ENSDARG00000019341
KEGG Gene (Danio rerio):553367 gpc1
Monarch:553367 gpc1
NCBI Gene:553367 gpc1
Reference Transcript
RefSeq:NM_001037373.1 gpc1
Participates
as a member of
Heparan(4)-PGs [Golgi lumen] (Danio rerio)
Other forms of this molecule
gpc1 [lysosomal lumen]
gpc1 [lysosomal lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [plasma membrane]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
gpc1 [Golgi lumen]
Inferred From
Heparan(4)-GPC1 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63651) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcN-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001032450.1
ZFIN
ZDB-GENE-051120-147
PRO
F1QCC6
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