Reactome | gpc3 [plasma membrane]

gpc3 [plasma membrane]

Stable Identifier

R-DRE-2076660

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

plasma membrane

Synonyms

HS(1)-GPC3, Q6V9Y8

Locations in the PathwayBrowser

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Metabolism (Danio rerio)

- Metabolism of carbohydrates (Danio rerio)
  - Glycosaminoglycan metabolism (Danio rerio)
    - Heparan sulfate/heparin (HS-GAG) metabolism (Danio rerio)
      - HS-GAG biosynthesis (Danio rerio)
        
        Some HSPGs are secreted to the plasma membrane (Danio rerio)
        
        HSPGs [plasma membrane] (Danio rerio)
        
        HS(1)-PGs [plasma membrane] (Danio rerio)
        
        gpc3 [plasma membrane] (Danio rerio)

External Reference Information

External Reference

UniProt:Q6V9Y8

Gene Names

gpc3

Reference Genes

BioGPS Gene:387365 gpc3

ENSEMBL:ENSDARG00000032199

KEGG Gene (Danio rerio):387365 gpc3

Monarch:387365 gpc3

NCBI Gene:387365 gpc3

Reference Transcript

RefSeq:NM_001305618.1 gpc3

Other Identifiers

13015577

13277312

387365

A_15_P190951

CUST_8911_PI428451953

CUST_8912_PI428451953

CUST_8913_PI428451953

CUST_9191_PI428451958

DRER04740

DRER29580

DRER42441

ENSDART00000039554

ENSDART00000039554_1

ENSDART00000039554_2

GT_Spec_XM_682922.6_298065

LOLT00025

MADDr01008276

OTTDART00000026799

OTTDART00000026800

XM_682922

Participates

as a member of

HS(1)-PGs [plasma membrane] (Danio rerio)

Other forms of this molecule

gpc3 [lysosomal lumen]

gpc3 [Golgi lumen]

gpc3 [plasma membrane]

gpc3 [Golgi lumen]

Inferred From

HS(1)-GPC3 [plasma membrane] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63652) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_001292547.1

ZFIN

ZDB-GENE-031212-1

Ensembl

ENSDARP00000142166, ENSDART00000173108, ENSDARG00000032199

PRO

Q6V9Y8

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