Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
col8a1b [endoplasmic reticulum lumen]
Stable Identifier
R-DRE-2172948
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
endoplasmic reticulum lumen
Synonyms
3x4Hyp-COL8A1(28-744), X1WGI4
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Collagen formation (Danio rerio)
Collagen biosynthesis and modifying enzymes (Danio rerio)
P4HB:4-Hyp collagen propeptides dissociates (Danio rerio)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col8a1b [endoplasmic reticulum lumen] (Danio rerio)
4-Hyp collagen propeptides:P4HB [endoplasmic reticulum lumen] (Danio rerio)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col8a1b [endoplasmic reticulum lumen] (Danio rerio)
Procollagen lysyl hydroxylases convert collagen lysines to 5-hydroxylysines (Danio rerio)
Lysyl hydroxylases:Lysyl hydroxylase procollagen substrates [endoplasmic reticulum membrane] (Danio rerio)
Lysyl hydroxylase procollagen substrates [endoplasmic reticulum lumen] (Danio rerio)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col8a1b [endoplasmic reticulum lumen] (Danio rerio)
Prolyl 4-hydroxylase converts collagen prolines to 4-hydroxyprolines (Danio rerio)
4-Hyp collagen propeptides:P4HB [endoplasmic reticulum lumen] (Danio rerio)
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
col8a1b [endoplasmic reticulum lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:X1WGI4
Gene Names
col8a1b
Reference Genes
BioGPS Gene:562442 col8a1b
CTD Gene:562442 col8a1b
ENSEMBL:ENSDARG00000003533
KEGG:dre:562442 col8a1b
Monarch:562442 col8a1b
NCBI Gene:562442 col8a1b
UCSC:X1WGI4 col8a1b
Reference Transcript
RefSeq:XM_005161783.5 col8a1b
RefSeq:XM_685822.10 col8a1b
Other Identifiers
13123601
562442
A_15_P139096
DRER02492
DRER52652
ENSDART00000019846
ENSDART00000019846_1
ENSDART00000019846_2
GO:0005198
GO:0005576
GO:0005581
GO:0005615
GO:0030020
GO:0030198
GO:0030312
GO:0031012
GO:0062023
GT_Xhyb_XM_005161783.1_318055
GT_Xhyb_XM_685822.6_393305
MADDr01000155
OTTDART00000021947
XM_685822
Participates
as a candidate of
4-Hyp collagen propeptides [endoplasmic reticulum lumen] (Danio rerio)
Other forms of this molecule
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
col8a1b [endoplasmic reticulum lumen]
Inferred From
3x4Hyp-COL8A1(28-744) [endoplasmic reticulum lumen]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Cross References
ENSEMBL
ENSDARG00000003533
,
ENSDARP00000156329
,
ENSDART00000154717
,
ENSDARP00000129340
,
ENSDART00000182377
ZFIN
ZDB-GENE-060503-140
© 2025
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text