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col28a1d [extracellular region]
Stable Identifier
R-DRE-2192959
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
extracellular region
Synonyms
3x4Hyp-GalHyl-COL28A1, A0A060Q6E4
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Collagen formation (Danio rerio)
Collagen biosynthesis and modifying enzymes (Danio rerio)
Secretion of collagens (Danio rerio)
Collagens and tropocollagens [extracellular region] (Danio rerio)
Non-fibrillar collagens [extracellular region] (Danio rerio)
Tropocollagen type XXVIII [extracellular region] (Danio rerio)
Collagen alpha-1(XXVIII) chains [extracellular region] (Danio rerio)
Homologues of 3x4Hyp-GalHyl-COL28A1 [extracellular region] (Danio rerio)
col28a1d [extracellular region] (Danio rerio)
External Reference Information
External Reference
UniProt:A0A060Q6E4
Gene Names
col28a1d
Reference Genes
BioGPS Gene:100332225 col28a1d
CTD Gene:100332225 col28a1d
ENSEMBL:ENSDARG00000087087
KEGG Gene (Danio rerio):100332225 col28a1d
Monarch:100332225 col28a1d
NCBI Gene:100332225 col28a1d
Reference Transcript
RefSeq:NM_001302249.1 col28a1d
Participates
as a member of
Homologues of 3x4Hyp-GalHyl-COL28A1 [extracellular region] (Danio rerio)
Other forms of this molecule
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [extracellular region]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
col28a1d [endoplasmic reticulum lumen]
Inferred From
3x4Hyp-GalHyl-COL28A1 [extracellular region]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
O5-galactosyl-L-hydroxylysine at unknown position
PsiMod Name
O5-galactosyl-L-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.
Cross References
RefSeq
NP_001289178.1
ZFIN
ZDB-GENE-160503-1
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