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3x4Hyp-3Hyp-COL8A1(?-744) [extracellular region]
Stable Identifier
R-DRE-2470328
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
extracellular region
Synonyms
X1WGI4
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Danio rerio)
Degradation of the extracellular matrix (Danio rerio)
Collagen degradation (Danio rerio)
Gelatin degradation by MMP1, 2, 3, 7, 8, 9, 12, 13 (Danio rerio)
Cleaved collagen fibrils [extracellular region] (Danio rerio)
Cleaved collagen type VIII fibril [extracellular region] (Danio rerio)
Cleaved tropocollagen type VIII [extracellular region] (Danio rerio)
Cleaved collagen alpha-1(VIII) chains [extracellular region] (Danio rerio)
3x4Hyp-3Hyp-COL8A1(?-744) [extracellular region] (Danio rerio)
External Reference Information
External Reference
UniProt:X1WGI4
Reference Genes
BioGPS Gene:562442
CTD Gene:562442
ENSEMBL:ENSDARG00000003533
ENSEMBL:ENSDARG00000003533.9
KEGG Gene (Danio rerio):562442
Monarch:562442
NCBI Gene:562442
Reference Transcript
RefSeq:XM_005161783.4
RefSeq:XM_685822.9
Other Identifiers
13123601
562442
A_15_P139096
DRER02492
DRER52652
ENSDART00000019846
ENSDART00000019846_1
ENSDART00000019846_2
GO:0005198
GO:0005201
GO:0005515
GO:0005576
GO:0005581
GO:0005615
GO:0030198
GO:0030312
GO:0031012
MADDr01000155
OTTDART00000021947
XM_685822
Participates
as a member of
Cleaved collagen alpha-1(VIII) chains [extracellular region] (Danio rerio)
Other forms of this molecule
3x4Hyp-3Hyp-GalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
GalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
GlcGalHyl-COL8A1(28-744) [endoplasmic reticulum lumen]
COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL8A1(28-744) [endoplasmic reticulum lumen]
5Hyl-COL8A1(28-744) [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL8A1(28-?) [extracellular region]
GalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-5Hyl-COL8A1(?-744) [extracellular region]
GalHyl-COL8A1(28-?) [extracellular region]
5Hyl-COL8A1(?-744) [extracellular region]
COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL8A1(28-?) [extracellular region]
3x4Hyp-5Hyl-COL8A1(28-?) [extracellular region]
GlcGalHyl-COL8A1(28-?) [extracellular region]
GalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL8A1(28-744) [extracellular region]
COL8A1(28-744) [extracellular region]
5Hyl-COL8A1(28-744) [extracellular region]
3x4Hyp-3Hyp-COL8A1(28-744) [extracellular region]
3x4Hyp-GlcGalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL8A1(28-744) [extracellular region]
3x4Hyp-GalHyl-COL8A1(28-744) [extracellular region]
GlcGalHyl-COL8A1(28-744) [extracellular region]
3x4Hyp-5Hyl-COL8A1(28-744) [extracellular region]
3x4Hyp-GlcGalHyl-COL8A1(28-?) [extracellular region]
GlcGalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-GlcGalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-GalHyl-COL8A1(?-744) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL8A1(28-?) [extracellular region]
COL8A1(28-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(28-?) [extracellular region]
3x4Hyp-3Hyp-5Hyl-COL8A1(?-744) [extracellular region]
3x4Hyp-COL8A1(28-?) [extracellular region]
5Hyl-COL8A1(28-?) [extracellular region]
3x4Hyp-GalHyl-COL8A1(28-?) [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL8A1(?-744) [extracellular region]
Inferred From
3x4Hyp-3Hyp-COL8A1(?-744) [extracellular region]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Cross References
RefSeq
XP_005161840.1
,
XP_690914.3
ZFIN
ZDB-GENE-060503-140
Ensembl
ENSDARP00000156329
,
ENSDARG00000003533
,
ENSDART00000182377
,
ENSDARP00000129340
,
ENSDART00000154717
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