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CDK9 [nucleoplasm]
Stable Identifier
R-DRE-51801
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
Q7SXE8
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
Generic Transcription Pathway (Danio rerio)
Transcriptional Regulation by TP53 (Danio rerio)
TP53 Regulates Transcription of DNA Repair Genes (Danio rerio)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Danio rerio)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Danio rerio)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Danio rerio)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Danio rerio)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
RNA Polymerase II Pre-transcription Events (Danio rerio)
Formation of P-TEFb complex (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
RNA polymerase II transcribes snRNA genes (Danio rerio)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Danio rerio)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
Integrator complex processes the 3' end of snRNA (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
Pre-snRNA is elongated and capped with 7-methylguanosine (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
P-TEFb complex [nucleoplasm] (Danio rerio)
CDK9 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:Q7SXE8
Reference Genes
BioGPS Gene:321602
ENSEMBL:ENSDARG00000044811
KEGG Gene (Danio rerio):321602
Monarch:321602
NCBI Gene:321602
Reference Transcript
RefSeq:NM_212591.1
Other Identifiers
13107875
321602
A_15_P116748
A_15_P261056
CJ013501
DRER09348
Dr.26326.1.S1_at
ENSDART00000065859
ENSDART00000065859_1
ENSDART00000065859_2
GO:0000166
GO:0002376
GO:0003824
GO:0004672
GO:0004674
GO:0004693
GO:0005524
GO:0005634
GO:0005654
GO:0005737
GO:0006281
GO:0006351
GO:0006355
GO:0006468
GO:0006954
GO:0006974
GO:0008353
GO:0016301
GO:0016310
GO:0016605
GO:0016740
GO:0030154
GO:0030852
GO:0036211
GO:0043226
GO:0045944
GO:0048856
GO:0051726
GO:0060043
GO:0061026
GO:0065003
GO:0090594
GO:0106310
GO:0120187
GO:0140096
LOLS05942
MADDr01007172
OTTDART00000026475
Participates
as an input of
Formation of P-TEFb complex (Danio rerio)
as a component of
P-TEFb complex [nucleoplasm] (Danio rerio)
Inferred From
CDK9 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_997756.1
ZFIN
ZDB-GENE-030131-321
Ensembl
ENSDARG00000044811
,
ENSDARP00000134607
,
ENSDART00000166287
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