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PNKP [nucleoplasm]
Stable Identifier
R-DRE-5649651
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
A0A2R8QSN3
Locations in the PathwayBrowser
Expand all
DNA Repair (Danio rerio)
Base Excision Repair (Danio rerio)
Resolution of Abasic Sites (AP sites) (Danio rerio)
APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway (Danio rerio)
LIG3 ligates NEIL1,NEIL2-generated single strand break (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
LIG3:XRCC1 and PNKP bind NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
PNKP hydrolyzes the terminal 3'Pi at the NEIL1,NEIL2-generated single strand break (SSB) (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
POLB incorporates a single nucleotide in place of excised AP residue in NEIL1,NEIL2-mediated AP site resolution (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
PNKP [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:A0A2R8QSN3
Reference Genes
ENSEMBL:ENSDARG00000100455
Other Identifiers
13018879
569462
DRER41534
GO:0003824
GO:0005515
GO:0006281
GO:0016740
GO:0016787
GO:0046403
GO:0046404
GT_Spec_XM_003200024.2_351737
GT_Xhyb_XM_005158269.1_386255
Participates
as an input of
LIG3:XRCC1 and PNKP bind NEIL1,NEIL2:POLB:SSB(3'Pi)-gap-dsDNA (Danio rerio)
as a component of
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB(3'Pi)-gap-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:POLB:LIG3:XRCC1:PNKP:SSB-gap-dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:dsDNA [nucleoplasm] (Danio rerio)
NEIL1,NEIL2:PNKP:POLB:LIG3:XRCC1:SSB-dsDNA [nucleoplasm] (Danio rerio)
Inferred From
PNKP [nucleoplasm]
(Homo sapiens)
Cross References
Ensembl
ENSDART00000188237
,
ENSDARG00000100455
,
ENSDARP00000156428
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