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wu:fa05d01 [nucleoplasm]
Stable Identifier
R-DRE-65563
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
GTF2E2, Q6NXA3
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
RNA polymerase II transcribes snRNA genes (Danio rerio)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Danio rerio)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
Integrator complex processes the 3' end of snRNA (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
Pre-snRNA is elongated and capped with 7-methylguanosine (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
TFIIE [nucleoplasm] (Danio rerio)
wu:fa05d01 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6NXA3
Gene Names
wu:fa05d01
Reference Genes
BioGPS Gene:334854 wu:fa05d01
ENSEMBL:ENSDARG00000012672
ENSEMBL:ENSDARG00000012672.9 wu:fa05d01
KEGG Gene (Danio rerio):334854 wu:fa05d01
Monarch:334854 wu:fa05d01
NCBI Gene:334854 wu:fa05d01
Reference Transcript
RefSeq:NM_212731.1 wu:fa05d01
Other Identifiers
12946729
334854
A_15_P482725
A_15_P746426
BC067173.1
DRER02006
DRER37290
Dr.51.1.S1_at
ENSDART00000016488_1
ENSDART00000016488_2
GO:0001097
GO:0003677
GO:0005634
GO:0005654
GO:0005673
GO:0006351
GO:0006367
GO:0043226
GO:0048856
LOLS09274
MADDr01007542
NM_212731
OTTDART00000023855
Participates
as a component of
TFIIE [nucleoplasm] (Danio rerio)
Inferred From
GTF2E2 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_997896.1
ZFIN
ZDB-GENE-030131-6794
Ensembl
ENSDART00000016488
,
ENSDARP00000020885
,
ENSDARG00000012672
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