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LOC555321 [nucleoplasm]
Stable Identifier
R-DRE-67411
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
XAB2, Q1LY92
Locations in the PathwayBrowser
Expand all
DNA Repair (Danio rerio)
Nucleotide Excision Repair (Danio rerio)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Danio rerio)
Dual incision in TC-NER (Danio rerio)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Danio rerio)
TC-NER incision complex [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Danio rerio)
TC-NER incision complex [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Danio rerio)
TC-NER pre-incision complex [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
Formation of TC-NER Pre-Incision Complex (Danio rerio)
UVSSA:USP7 deubiquitinates ERCC6 (Danio rerio)
TC-NER pre-incision complex [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
Metabolism of RNA (Danio rerio)
Processing of Capped Intron-Containing Pre-mRNA (Danio rerio)
mRNA Splicing (Danio rerio)
mRNA Splicing - Major Pathway (Danio rerio)
Formation of the Spliceosomal P complex and exon ligation (Danio rerio)
Spliceosomal C* complex [nucleoplasm] (Danio rerio)
PRP19-CDC5L related complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
Spliceosomal P complex [nucleoplasm] (Danio rerio)
PRP19-CDC5L related complex [nucleoplasm] (Danio rerio)
LOC555321 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:Q1LY92
Gene Names
LOC555321
Reference Genes
BioGPS Gene:387600 LOC555321
ENSEMBL:ENSDARG00000007092
ENSEMBL:ENSDARG00000007092.5 LOC555321
KEGG Gene (Danio rerio):387600 LOC555321
Monarch:387600 LOC555321
NCBI Gene:387600 LOC555321
Reference Transcript
RefSeq:NM_001044783.1 LOC555321
Other Identifiers
13170378
387600
A_15_P213056
A_15_P608761
A_15_P631446
A_15_P664281
DRER01379
Dr.12501.1.A1_at
ENSDART00000011780
ENSDART00000011780_1
ENSDART00000011780_2
GO:0000349
GO:0000398
GO:0000974
GO:0005515
GO:0005634
GO:0006396
GO:0016071
GO:0043226
GO:0065003
GO:0071007
GO:0071014
GT_Spec_NM_001044783.1_277245
LOLS11087
MADDr01009038
NM_001044783
OTTDART00000013306
Participates
as a component of
PRP19-CDC5L related complex [nucleoplasm] (Danio rerio)
XAB2 complex [nucleoplasm] (Danio rerio)
Inferred From
XAB2 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001038248.1
ZFIN
ZDB-GENE-040426-685
Ensembl
ENSDARP00000010070
,
ENSDART00000011780
,
ENSDARG00000007092
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