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zgc:56310 [nucleoplasm]
Stable Identifier
R-DRE-68459
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
RPA3, Q7ZUZ6
Locations in the PathwayBrowser
Expand all
Cell Cycle (Danio rerio)
Cell Cycle Checkpoints (Danio rerio)
G2/M Checkpoints (Danio rerio)
Activation of ATR in response to replication stress (Danio rerio)
Recruitment of Rad17-RFC complex to DNA (Danio rerio)
RPA complexed to ssDNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Rad17-RFC complex bound to DNA [nucleoplasm] (Danio rerio)
RPA complexed to ssDNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Stalling of DNA replication fork and RPA binding (Danio rerio)
RPA complexed to ssDNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
DNA Repair (Danio rerio)
DNA Damage Bypass (Danio rerio)
Recognition of DNA damage by PCNA-containing replication complex (Danio rerio)
USP1:WDR48 binds monoUb:K164-PCNA (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:Damaged DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:USP1:WDR48:Damaged DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:Damaged DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
USP1:WDR48 deubiquitinates monoUb:K164-PCNA (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:USP1:WDR48:Damaged DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:Damaged DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
PCNA:RPA:RFC:Damaged DNA Template [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template (Danio rerio)
Termination of translesion DNA synthesis (Danio rerio)
TRIM25 binds monoUb:164-PCNA (Danio rerio)
DNA polymerase Y:MonoUb:K164-PCNA:RPA:RFC:TLS-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
UBE2L6:TRIM25:DNA polymerase Y:MonoUb:K164-PCNA:RPA:RFC:TLS-DNA Template [nucleoplasm] (Danio rerio)
DNA polymerase Y:MonoUb:K164-PCNA:RPA:RFC:TLS-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Translesion Synthesis by POLH (Danio rerio)
Elongation by POLH (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA)-DNA Template [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Insertion of correct bases opposite the lesion by POLH (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA)-DNA Template [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:TT-CPD-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:TT-CPD-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
POLH binds monoUb:K164-PCNA at damaged TT-CPD-DNA template (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:TT-CPD-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:TT-CPD-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:TT-CPD-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
SPRTN binds monoUb:K164-PCNA associated with POLH (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
SPRTN recruits VCP to monoUb:K164-PCNA associated with POLH (Danio rerio)
NPLOC4:UFD1L:VCP:SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
SPRTN:VCP-mediated release of POLH from monoUb:K164-PCNA (Danio rerio)
NPLOC4:UFD1L:VCP:SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
SPRTN:POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
POLH:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
NPLOC4:UFD1L:VPC:SPRTN:MonoUb:K164-PCNA:RPA:RFC:(TT-CPD:AA-polydNMP)-Template DNA [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Translesion synthesis by POLI (Danio rerio)
POLI incorporates dNMP opposite to damaged DNA base (Danio rerio)
POLI:REV1:POLZ:MonoUb:K164-PCNA:RPA:RFC:(EtAD:T)-DNA Template,(Gamma-HOPdG:C)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:(EtAD:T)-DNA Template,(Gamma-HOPdG:C)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
POLI:REV1:POLZ:MonoUb:K164-PCNA:RPA:RFC:EtAD-DNA Template,Gamma-HOPdG-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:EtAD-DNA Template,Gamma-HOPdG-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Translesion synthesis by REV1 (Danio rerio)
REV1 binds AP-dsDNA (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:AP-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
REV1:MonoUb:K164-PCNA:RPA:RFC:AP-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:AP-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
REV1 inserts dCMP opposite to AP sites in DNA (Danio rerio)
REV1:MonoUb:K164-PCNA:RPA:RFC:(AP:Cyt)-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:(AP:Cyt)-dsDNA [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
REV1:MonoUb:K164-PCNA:RPA:RFC:AP-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC:AP-DNA Template [nucleoplasm] (Danio rerio)
MonoUb:K164-PCNA:RPA:RFC [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
DNA Double-Strand Break Repair (Danio rerio)
Homology Directed Repair (Danio rerio)
HDR through Homologous Recombination (HRR) or Single Strand Annealing (SSA) (Danio rerio)
Processing of DNA double-strand break ends (Danio rerio)
PPP4C:PPP4R2 dephosphorylates RPA2 (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
p-RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Mismatch Repair (Danio rerio)
Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha) (Danio rerio)
EXO1 interacting with MSH2:MSH6 excises single strand DNA containing a mismatch (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
RPA:DNA containing single strand gap [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Nucleotide Excision Repair (Danio rerio)
Global Genome Nucleotide Excision Repair (GG-NER) (Danio rerio)
Dual Incision in GG-NER (Danio rerio)
5'- incision of DNA by ERCC1:ERCC4 in GG-NER (Danio rerio)
GG-NER incision complex:5'-incised damaged DNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
GG-NER incision complex:Open bubble dsDNA [nucleoplasm] (Danio rerio)
GG-NER pre-incision complex:Open bubble-dsDNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Formation of Incision Complex in GG-NER (Danio rerio)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in GG-NER (Danio rerio)
GG-NER incision complex:Open bubble dsDNA [nucleoplasm] (Danio rerio)
GG-NER pre-incision complex:Open bubble-dsDNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
GG-NER pre-incision complex:Open bubble-dsDNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Danio rerio)
Dual incision in TC-NER (Danio rerio)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Danio rerio)
TC-NER incision complex [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Danio rerio)
TC-NER incision complex [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
zgc:56310 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:Q7ZUZ6
Gene Names
zgc:56310
Reference Genes
BioGPS Gene:393196 zgc:56310
ENSEMBL:ENSDARG00000002613
KEGG Gene (Danio rerio):393196 zgc:56310
Monarch:393196 zgc:56310
NCBI Gene:393196 zgc:56310
Reference Transcript
RefSeq:NM_200227.1 zgc:56310
Participates
as a component of
RPA1-4 [nucleoplasm] (Danio rerio)
p-RPA heterotrimer [nucleoplasm] (Danio rerio)
RPA heterotrimer [nucleoplasm] (Danio rerio)
Inferred From
RPA3 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_956521.1
ZFIN
ZDB-GENE-040426-977
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