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hm:zeh0819 [cytosol]
Stable Identifier
R-DRE-72387
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
RPS9, Q6P5M3
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
SMG6 hydrolyzes mRNA with premature termination codon (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Danio rerio)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Danio rerio)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
Metabolism of proteins (Danio rerio)
Translation (Danio rerio)
Eukaryotic Translation Initiation (Danio rerio)
Cap-dependent Translation Initiation (Danio rerio)
Formation of a pool of free 40S subunits (Danio rerio)
Release of 40S and 60S subunits from the 80S ribosome (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
eIF3 and eIF1A bind to the 40S subunit (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
40S:eIF3:eIF1A [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
Formation of the ternary complex, and subsequently, the 43S complex (Danio rerio)
Formation of the 43S pre-initiation complex (Danio rerio)
40S:eIF3:eIF1A [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
Ribosomal scanning and start codon recognition (Danio rerio)
Ribosomal scanning (Danio rerio)
48S complex [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
Start codon recognition (Danio rerio)
48S complex [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
L13a-mediated translational silencing of Ceruloplasmin expression (Danio rerio)
Association of phospho-L13a with GAIT element of Ceruloplasmin mRNA (Danio rerio)
43S: Ceruloplasmin mRNA:eIF4F:eIF4B:eIF4H:PABP [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
phospho-L13a associated wth the 3' UTR GAIT element of ceruloplasmin mRNA within the translation initiation complex [cytosol] (Danio rerio)
43S: Ceruloplasmin mRNA:eIF4F:eIF4B:eIF4H:PABP [cytosol] (Danio rerio)
43S complex [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
SRP-dependent cotranslational protein targeting to membrane (Danio rerio)
Nascent polypeptide:mRNA:ribosome complex binds signal recognition particle (SRP) (Danio rerio)
SRP:polypeptide+signal:ribosome [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
ribosome:mRNA:polypeptide+signal [cytosol] (Danio rerio)
80S ribosome [cytosol] (Danio rerio)
40S ribosomal complex [cytosol] (Danio rerio)
hm:zeh0819 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6P5M3
Gene Names
hm:zeh0819
Reference Genes
BioGPS Gene:114420 hm:zeh0819
ENSEMBL:ENSDARG00000011405
ENSEMBL:ENSDARG00000011405.12 hm:zeh0819
KEGG Gene (Danio rerio):114420 hm:zeh0819
Monarch:114420 hm:zeh0819
NCBI Gene:114420 hm:zeh0819
Reference Transcript
RefSeq:NM_200852.3 hm:zeh0819
Other Identifiers
114420
12925441
12925443
12925445
12925447
12925449
12925451
12925453
12925455
12925457
12927121
12927123
12927125
12927127
12927129
12927131
12927133
12927135
12927137
12927181
12927183
12927185
12927187
12927189
12927191
12927193
12927195
12927197
12927241
12927243
12927245
12927247
12927249
12927251
12927253
12927255
12927257
12929275
12929277
12929279
12929281
12929283
12929285
12929287
12929289
12929291
12929335
12929337
12929339
12929341
12929343
12929345
12929347
12929349
12929351
12933413
12933415
12933417
12933419
12933421
12933423
12933425
12933427
12933429
12933785
12933787
12933789
12933791
12933793
12933795
12933797
12933799
12933801
13032952
A_15_P193236
A_15_P256311
A_15_P346640
CUST_19132_PI428451953
CUST_19133_PI428451953
DRER33418
Dr.1360.1.S1_at
ENSDART00000048579_1
ENSDART00000048579_2
ENSDART00000110385
ENSDART00000112654
ENSDART00000112907
GO:0002376
GO:0003723
GO:0003735
GO:0005198
GO:0005829
GO:0005840
GO:0006412
GO:0015935
GO:0019843
GO:0022627
GO:0030154
GO:0042254
GO:0042274
GO:0043226
GO:0043362
GO:0048856
GO:1990904
OTTDART00000023646
ZV700S00001064
Participates
as a component of
40S ribosomal complex [cytosol] (Danio rerio)
Other forms of this molecule
hm:zeh0819 [nucleoplasm]
Inferred From
RPS9 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_957146.1
ZFIN
ZDB-GENE-010724-15
Ensembl
ENSDARP00000147936
,
ENSDART00000176928
,
ENSDARG00000011405
,
ENSDART00000193733
,
ENSDARP00000144431
PDB
7OYA
,
7OYB
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