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smg1 [cytosol]
Stable Identifier
R-DRE-927760
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
cytosol
Synonyms
SMG1, C5J7W8
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Danio rerio)
Nonsense-Mediated Decay (NMD) (Danio rerio)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Danio rerio)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
SMG1:SMG8:SMG9 Complex [cytosol] (Danio rerio)
smg1 [cytosol] (Danio rerio)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
SMG1:SMG8:SMG9 Complex [cytosol] (Danio rerio)
smg1 [cytosol] (Danio rerio)
smg1 [cytosol] (Danio rerio)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Danio rerio)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Danio rerio)
SMG1:SMG8:SMG9 Complex [cytosol] (Danio rerio)
smg1 [cytosol] (Danio rerio)
External Reference Information
External Reference
UniProt:C5J7W8
Gene Names
smg1
Reference Genes
BioGPS Gene:569810 smg1
ENSEMBL:ENSDARG00000054570
KEGG Gene (Danio rerio):569810 smg1
Monarch:569810 smg1
NCBI Gene:569810 smg1
Reference Transcript
RefSeq:NM_001080044.2 smg1
Other Identifiers
13175446
13285366
569810
A_15_P113906
A_15_P187551
A_15_P416645
A_15_P499777
A_15_P540942
A_15_P730321
CUST_20262_PI428451953
CUST_5640_PI428451958
DRER10688
DRER10693
ENSDART00000076796
GO:0000166
GO:0000184
GO:0003824
GO:0004674
GO:0005515
GO:0005524
GO:0005634
GO:0005737
GO:0016071
GO:0016301
GO:0016310
GO:0016740
GO:0043226
GO:0140096
GT_Spec_NM_001080044.2_318905
LOLS04440
MADDr01003404
XM_693217
XM_693513
Participates
as a component of
SMG1:SMG8:SMG9 Complex [cytosol] (Danio rerio)
Inferred From
SMG1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001073513.2
ZFIN
ZDB-GENE-061013-767
Ensembl
ENSDARG00000054570
,
ENSDART00000076796
,
ENSDARP00000071267
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